RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 IPPQ9Y573 584 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 A0A0G2JNJ9 132 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 TCEA3O75764 348 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 UBXN7O94888 489 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 HMGCRP04035 888 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 AGFG1P52594 562 aaKnown RBP5.69□□□□□ -1.5
CSDE1-211ENST00000525970 RRADP55042 308 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 FAM193AP78312 1265 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 CRB2Q5IJ48 1285 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 KANK2Q63ZY3 851 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 GRAMD4Q6IC98 578 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 KIAA1841Q6NSI8 718 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 TIGD7Q6NT04 549 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-211ENST00000525970 UNQ6494/PRO21346Q6UXR6 183 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 RNF207Q6ZRF8 634 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 DENND1CQ8IV53 801 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 ENAHQ8N8S7 591 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-211ENST00000525970 PARD3BQ8TEW8 1205 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 NEIL1Q96FI4 390 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-211ENST00000525970 LRRC37BQ96QE4 947 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 ZNF341Q9BYN7 854 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 RSAD1Q9HA92 442 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 IFT122Q9HBG6 1241 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 Q9UFV3 132 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 LIMCH1Q9UPQ0 1083 aa5.69□□□□□ -1.5
CSDE1-211ENST00000525970 ABHD14A-ACY1A0A1B0GW23 586 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 HTRA2O43464 458 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-211ENST00000525970 ZNF888P0CJ79 500 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-211ENST00000525970 COMTP21964 271 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 LGALS4P56470 323 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 MAP3K12Q12852 859 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 LLGL1Q15334 1064 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 PGS1Q32NB8 556 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 UAP1L1Q3KQV9 507 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 HSP90AB4PQ58FF6 505 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 XRRA1Q6P2D8 792 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 SRLQ86TD4 932 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 RTKN2Q8IZC4 609 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 KRT78Q8N1N4 520 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 RSAD2Q8WXG1 361 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 ADOQ96SZ5 270 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 BHMT2Q9H2M3 363 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 FNIP2Q9P278 1114 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 DPP7Q9UHL4 492 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 PRSS50Q9UI38 385 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 SCOCQ9UIL1 159 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 DENND2AQ9ULE3 1009 aa5.68□□□□□ -1.5
CSDE1-211ENST00000525970 ALDH2P05091 517 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 TYRP1P17643 537 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 ETV4P43268 484 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 MEOX1P50221 254 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 STAT5BP51692 787 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 RAC3P60763 192 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 TGFB2P61812 414 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 NOLC1Q14978 699 aaKnown RBP eCLIP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 EIF4HQ15056 248 aaKnown RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 RALBP1Q15311 655 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 TAX1BP1Q86VP1 789 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 FAM186BQ8IYM0 893 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 PPM1EQ8WY54 764 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 RPGRQ92834 1020 aaKnown RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 FERMT2Q96AC1 680 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 ZNF503Q96F45 646 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 MYD88Q99836 296 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 B3GNT5Q9BYG0 378 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 PITHD1Q9GZP4 211 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 PPCSQ9HAB8 311 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 MSL2Q9HCI7 577 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 GNL3LQ9NVN8 582 aaKnown RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 MAGEL2Q9UJ55 1249 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 ING1Q9UK53 422 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-211ENST00000525970 FAM184BQ9ULE4 1060 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 POLHQ9Y253 713 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 CDY2AQ9Y6F7 541 aa5.67□□□□□ -1.5
CSDE1-211ENST00000525970 RAD17O75943 681 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 MYL3P08590 195 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 SETSIPP0DME0 302 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 TRAPPC10P48553 1259 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 SLC16A1P53985 500 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 ADCY2Q08462 1091 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 ADRM1Q16186 407 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 LONRF1Q17RB8 773 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 ZMAT1Q5H9K5 638 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 SWSAP1Q6NVH7 229 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 NPNTQ6UXI9 565 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 CCDC149Q6ZUS6 474 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 PPM1NQ8N819 430 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSDE1-211ENST00000525970 PNISRQ8TF01 805 aaKnown RBP5.66□□□□□ -1.5
CSDE1-211ENST00000525970 PGBD4Q96DM1 585 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 TNIP3Q96KP6 325 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 SGCZQ96LD1 299 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 SAE1Q9UBE0 346 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-211ENST00000525970 DMTF1Q9Y222 760 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 SLC30A1Q9Y6M5 507 aa5.66□□□□□ -1.5
CSDE1-211ENST00000525970 MYPNQ86TC9 1320 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms