RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SLC5A5Q92911 643 aa5.95□□□□□ -1.46
CSDE1-210ENST00000525878 PAWRQ96IZ0 340 aaKnown RBP5.95□□□□□ -1.46
CSDE1-210ENST00000525878 KCTD10Q9H3F6 313 aa5.95□□□□□ -1.46
CSDE1-210ENST00000525878 PLAAQ9Y263 795 aa5.95□□□□□ -1.46
CSDE1-210ENST00000525878 UNC119BA6NIH7 251 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 GSG1L2A8MUP6 293 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 PJA2O43164 708 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 SPDEFO95238 335 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 HLA-DOAP06340 250 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 SPATA31D3P0C874 917 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 FLT3LGP49771 235 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 SCAPQ12770 1279 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 TP53BP2Q13625 1128 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 AGAP9Q5VTM2 703 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 SPATA31D4Q6ZUB0 917 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 PDZD4Q76G19 769 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-210ENST00000525878 FAM98AQ8NCA5 519 aaKnown RBP5.94□□□□□ -1.46
CSDE1-210ENST00000525878 RNF169Q8NCN4 708 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 MFSD3Q96ES6 412 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 DRC1Q96MC2 740 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 FEZ1Q99689 392 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 POGKQ9P215 609 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 FPGT-TNNI3KV9GXZ4 949 aa5.94□□□□□ -1.46
CSDE1-210ENST00000525878 DRGXA6NNA5 263 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 CFIP05156 583 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 LPLP06858 475 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 CD38P28907 300 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 LGALS4P56470 323 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 MST1LQ2TV78 715 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 CT83Q5H943 113 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 FAM47AQ5JRC9 791 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 ARMC6Q6NXE6 501 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 SIMC1Q8NDZ2 872 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 ZFP28Q8NHY6 868 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 SLC35B2Q8TB61 432 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 ZNF480Q8WV37 535 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 CAVIN3Q969G5 261 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 FUBP1Q96AE4 644 aaKnown RBP5.93□□□□□ -1.46
CSDE1-210ENST00000525878 MAP3K2Q9Y2U5 619 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 USP15Q9Y4E8 981 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-210ENST00000525878 COL11A2P13942 1736 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-210ENST00000525878 RPTORQ8N122 1335 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 ATRNL1Q5VV63 1379 aa5.93□□□□□ -1.46
CSDE1-210ENST00000525878 A0A087X0B3 334 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 RAB11FIP3O75154 756 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 ESRRBO95718 433 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 ZNF37AP17032 561 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-210ENST00000525878 BPIP17213 487 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 LMO1P25800 156 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 MPLP40238 635 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 RESTQ13127 1097 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 RD3Q7Z3Z2 195 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 KIAA0907Q7Z7F0 614 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-210ENST00000525878 ADARB2Q9NS39 739 aaKnown RBP5.92□□□□□ -1.46
CSDE1-210ENST00000525878 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
CSDE1-210ENST00000525878 INSL6Q9Y581 213 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 MAST3O60307 1309 aa5.92□□□□□ -1.46
CSDE1-210ENST00000525878 ADCY6O43306 1168 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 PHF2O75151 1096 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 ELANEP08246 267 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 CHN2P52757 468 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 CLRN1P58418 232 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 FSCN1Q16658 493 aaKnown RBP5.91□□□□□ -1.46
CSDE1-210ENST00000525878 FBXO42Q6P3S6 717 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 ZNF572Q7Z3I7 529 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-210ENST00000525878 RHOT2Q8IXI1 618 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 EAF2Q96CJ1 260 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-210ENST00000525878 PNPLA7Q6ZV29 1317 aa5.91□□□□□ -1.46
CSDE1-210ENST00000525878 CXorf49A8MYA2 514 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-210ENST00000525878 WNT10BO00744 389 aa5.9□□□□□ -1.46
CSDE1-210ENST00000525878 CDC45O75419 566 aa5.9□□□□□ -1.46
CSDE1-210ENST00000525878 ATP13A4Q4VNC1 1196 aa5.9□□□□□ -1.46
CSDE1-210ENST00000525878 ATXN7L2Q5T6C5 722 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-210ENST00000525878 ZKSCAN2Q63HK3 967 aa5.9□□□□□ -1.46
CSDE1-210ENST00000525878 SLC9A6Q92581 669 aa5.9□□□□□ -1.46
CSDE1-210ENST00000525878 KLHL11Q9NVR0 708 aa5.9□□□□□ -1.46
CSDE1-210ENST00000525878 INO80B-WBP1J3KQ70 363 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 CDKL5O76039 1030 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 ALOX15P16050 662 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-210ENST00000525878 CANXP27824 592 aaKnown RBP5.89□□□□□ -1.47
CSDE1-210ENST00000525878 CXCR5P32302 372 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 MPP3Q13368 585 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 UGT8Q16880 541 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 ERCC6LQ2NKX8 1250 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 B3GNTL1Q67FW5 361 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-210ENST00000525878 Q6ZVL8 140 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 TRMT2AQ8IZ69 625 aaKnown RBP5.89□□□□□ -1.47
CSDE1-210ENST00000525878 OR56A1Q8NGH5 318 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 INO80BQ9C086 356 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-210ENST00000525878 TOPORSQ9NS56 1045 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-210ENST00000525878 FAM30AQ9NZY2 134 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 ATP11BQ9Y2G3 1177 aa5.89□□□□□ -1.47
CSDE1-210ENST00000525878 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-210ENST00000525878 SNRPA1P09661 255 aaKnown RBP5.88□□□□□ -1.47
CSDE1-210ENST00000525878 ENPP1P22413 925 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 PLA2G5P39877 138 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 PTH2RP49190 550 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 DHCR24Q15392 516 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 GPR149Q86SP6 731 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 TMEM132CQ8N3T6 1108 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms