RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CDK5RAP2Q96SN8 1893 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 SPTBN1Q01082 2364 aaKnown RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 KIF16BQ96L93 1317 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 NBASA2RRP1 2371 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 DNAJC25-GNG10A0A024R161 153 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 C4orf47A7E2U8 309 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 B4GALT3O60512 393 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 NADKO95544 446 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 HPXP02790 462 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 CYP2C19P33261 490 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 ZNF445P59923 1031 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 CYP4F3Q08477 520 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 GPM6BQ13491 265 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 PLCL1Q15111 1095 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 RALGPS1Q5JS13 557 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 RTP2Q5QGT7 225 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 DCAF15Q66K64 600 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 CCNI2Q6ZMN8 369 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 ATG4DQ86TL0 474 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 TP53INP2Q8IXH6 220 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 DEFB124Q8NES8 71 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 CMASQ8NFW8 434 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 SUSD6Q92537 303 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 MED8Q96G25 268 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 TCTN2Q96GX1 697 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 SCLYQ96I15 445 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 ALPK1Q96QP1 1244 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 METTL14Q9HCE5 456 aaKnown RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 SPATA6Q9NWH7 488 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 NOP58Q9Y2X3 529 aaKnown RBP4.01□□□□□ -1.77
CSDE1-209ENST00000525132 ZNF451Q9Y4E5 1061 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 SLC12A7Q9Y666 1083 aa4.01□□□□□ -1.77
CSDE1-209ENST00000525132 SPAARA0A1B0GVQ0 90 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 A1L4Q6 167 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 C2CD4DB7Z1M9 353 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 SMAD7O15105 426 aaKnown RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 DIAPH1O60610 1272 aaKnown RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 SHOX2O60902 331 aaPredicted RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 SSBP05455 408 aaKnown RBP eCLIP4□□□□□ -1.77
CSDE1-209ENST00000525132 CD247P20963 164 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 CSRP1P21291 193 aaKnown RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 GDNFP39905 211 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 EIF2S3P41091 472 aaKnown RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 CDK7P50613 346 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 TDGQ13569 410 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 NR0B2Q15466 257 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 TDRD10Q5VZ19 366 aaKnown RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 CLEC4GQ6UXB4 293 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 RNF111Q6ZNA4 994 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 DEFB128Q7Z7B8 93 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 SOCS4Q8WXH5 440 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 MKL1Q969V6 931 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 WRNIP1Q96S55 665 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 MYL10Q9BUA6 226 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 BRINP2Q9C0B6 783 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 WNT8AQ9H1J5 351 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 HIPK3Q9H422 1215 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 TBC1D17Q9HA65 648 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4□□□□□ -1.77
CSDE1-209ENST00000525132 STARD7Q9NQZ5 370 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 CHST7Q9NS84 486 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 GFOD1Q9NXC2 390 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 DKK3Q9UBP4 350 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 DUSP13Q9UII6 198 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 DENND2AQ9ULE3 1009 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 PNMA8BQ9ULN7 279 aaPredicted RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 BARX2Q9UMQ3 279 aaPredicted RBP4□□□□□ -1.77
CSDE1-209ENST00000525132 PCDHB12Q9Y5F1 795 aa4□□□□□ -1.77
CSDE1-209ENST00000525132 F5H6K3 240 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 H3BNC9 293 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 EPHX1P07099 455 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 ZNF806P0C7X5 589 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 JUNBP17275 347 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-209ENST00000525132 TAL1P17542 331 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-209ENST00000525132 RGS2P41220 211 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 EGR3Q06889 387 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 EPC2Q52LR7 807 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 TNNI3KQ59H18 835 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 FAM47AQ5JRC9 791 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 FYB2Q5VWT5 728 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 FILIP1Q7Z7B0 1213 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 CREG2Q8IUH2 290 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 DHX37Q8IY37 1157 aaKnown RBP3.99□□□□□ -1.77
CSDE1-209ENST00000525132 ARHGEF39Q8N4T4 335 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 CELF2-AS1Q8N7Q2 184 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 TEPSINQ96N21 525 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 EYA3Q99504 573 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 MCMBPQ9BTE3 642 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 SLC12A9Q9BXP2 914 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 MKRN2Q9H000 416 aaKnown RBP3.99□□□□□ -1.77
CSDE1-209ENST00000525132 SMOC1Q9H4F8 434 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 RC3H2Q9HBD1 1191 aaKnown RBP3.99□□□□□ -1.77
CSDE1-209ENST00000525132 IFT57Q9NWB7 429 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 DKK4Q9UBT3 224 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 TMEM59LQ9UK28 342 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 PCDHB10Q9UN67 800 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 COL4A3BPQ9Y5P4 624 aa3.99□□□□□ -1.77
CSDE1-209ENST00000525132 MYO7AQ13402 2215 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms