RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PLCD4Q9BRC7 762 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 C12orf65Q9H3J6 166 aaKnown RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 SLC5A4Q9NY91 659 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 FRMPD4Q14CM0 1322 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 CDK5RAP2Q96SN8 1893 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 GM2AP17900 193 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 SESN3P58005 492 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 JAG1P78504 1218 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 PPP1R18Q6NYC8 613 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 ERP27Q96DN0 273 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 MYLK2Q9H1R3 596 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 TOPORSQ9NS56 1045 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 PASKQ96RG2 1323 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CFAP73A6NFT4 308 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 DDTLA6NHG4 134 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CBX6O95503 412 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CYP3A4P08684 503 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 TUBP50607 506 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 TAF11Q15544 211 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 BMT2Q1RMZ1 405 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CDC42EP5Q6NZY7 148 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 ZBTB10Q96DT7 871 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
CAPN1-202ENST00000524773 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 PODXLO00592 558 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CYP3A7P24462 503 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 ADCY8P40145 1251 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CAPRIN2Q6IMN6 1127 aaKnown RBP14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CCDC174Q6PII3 467 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 SIAH1Q8IUQ4 282 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 C4orf33Q8N1A6 199 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 TTC8Q8TAM2 541 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 CRYGNQ8WXF5 182 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 NAALADL1Q9UQQ1 740 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 ARL2BPQ9Y2Y0 163 aa14.09□□□□□ -0.15
CAPN1-202ENST00000524773 BRWD3Q6RI45 1802 aa14.08□□□□□ -0.15
CAPN1-202ENST00000524773 K7ENM7 598 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 GJB6O95452 261 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 ATP2A2P16615 1042 aaKnown RBP14.08□□□□□ -0.16
CAPN1-202ENST00000524773 DRG2P55039 364 aaKnown RBP14.08□□□□□ -0.16
CAPN1-202ENST00000524773 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 TNFAIP8L3Q5GJ75 292 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 THEMIS2Q5TEJ8 643 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 PI4K2AQ9BTU6 479 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 ARHGEF3Q9NR81 526 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 GAKO14976 1311 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 GTPBP10A4D1E9 387 aaKnown RBP14.08□□□□□ -0.16
CAPN1-202ENST00000524773 WDR91A4D1P6 747 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 POC1B-GALNT4F8VUJ3 575 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 ALAS1P13196 640 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 IL1R1P14778 569 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 RBM5P52756 815 aaKnown RBP eCLIP14.08□□□□□ -0.16
CAPN1-202ENST00000524773 KIF22Q14807 665 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 TMEM63BQ5T3F8 832 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 PRR5LQ6MZQ0 368 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 CRELD2Q6UXH1 353 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-202ENST00000524773 FBXO11Q86XK2 927 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 RHOT2Q8IXI1 618 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 PARD3BQ8TEW8 1205 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 CKAP2Q8WWK9 683 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 SAAL1Q96ER3 474 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 KREMEN1Q96MU8 473 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 PITPNM3Q9BZ71 974 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
CAPN1-202ENST00000524773 GSTTP1A0A1W2PQM5 241 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 F5H6K3 240 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 HIP1RO75146 1068 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 BANF1O75531 89 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 WDR4P57081 412 aaKnown RBP14.07□□□□□ -0.16
CAPN1-202ENST00000524773 RIPK1Q13546 671 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 VSIG1Q86XK7 387 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 EPS8L1Q8TE68 723 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 SEMA4DQ92854 862 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 HSD17B14Q9BPX1 270 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 KIFC3Q9BVG8 833 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 CCDC134Q9H6E4 229 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 MTUS1Q9ULD2 1270 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 ENTPD5O75356 428 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 ZSCAN5DPP0CG00 497 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 ARP10275 920 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 BMP3P12645 472 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 RRM1P23921 792 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 EPHB2P29323 1055 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 SSR1P43307 286 aaKnown RBP14.07□□□□□ -0.16
CAPN1-202ENST00000524773 PSMC4P43686 418 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 ZYXQ15942 572 aaKnown RBP14.07□□□□□ -0.16
CAPN1-202ENST00000524773 OTOP1Q7RTM1 612 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 MAB21L3Q8N8X9 362 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 GLIS1Q8NBF1 620 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 SUPT20HQ8NEM7 779 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 AMNQ9BXJ7 453 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 RXFP1Q9HBX9 757 aa14.07□□□□□ -0.16
CAPN1-202ENST00000524773 ALG13Q9NP73 1137 aaKnown RBP14.07□□□□□ -0.16
CAPN1-202ENST00000524773 OLFML3Q9NRN5 406 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms