RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 EXOC8Q8IYI6 725 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 RPUSD2Q8IZ73 545 aaKnown RBP7.73□□□□□ -1.17
VPS11-201ENST00000524454 MCPH1Q8NEM0 835 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 OR8K1Q8NGG5 319 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 DNAJB3Q8WWF6 145 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 KIFAP3Q92845 792 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 GUCD1Q96NT3 240 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 PPP1R16BQ96T49 567 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 PBX4Q9BYU1 374 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 FAM49AQ9H0Q0 323 aaPredicted RBP7.73□□□□□ -1.17
VPS11-201ENST00000524454 NKX2-4Q9H2Z4 354 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 SMARCAD1Q9H4L7 1026 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 AZI2Q9H6S1 392 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 TMEM206Q9H813 350 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 TAB2Q9NYJ8 693 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 RGL1Q9NZL6 768 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 MAPK8IP1Q9UQF2 711 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 SAMM50Q9Y512 469 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 ATP8B3O60423 1300 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 IGSF9BQ9UPX0 1349 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 COL4A4P53420 1690 aaPredicted RBP7.73□□□□□ -1.17
VPS11-201ENST00000524454 TMEM150BA6NC51 233 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 RSPH10B2B2RC85 870 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 PMM2O15305 246 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 ARHGEF15O94989 841 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 ATG7O95352 703 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 RSPH10BP0C881 870 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 ATP2A2P16615 1042 aaKnown RBP7.72□□□□□ -1.17
VPS11-201ENST00000524454 TRIM21P19474 475 aaKnown RBP7.72□□□□□ -1.17
VPS11-201ENST00000524454 ATP4AP20648 1035 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 NR2F2P24468 414 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 CASP14P31944 242 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 YWHABP31946 246 aaKnown RBP7.72□□□□□ -1.17
VPS11-201ENST00000524454 RFC2P35250 354 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 RBL2Q08999 1139 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 TUBB2AQ13885 445 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 PPP2R5AQ15172 486 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 DNTTIP2Q5QJE6 756 aaKnown RBP7.72□□□□□ -1.17
VPS11-201ENST00000524454 MIS18BP1Q6P0N0 1132 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 FAM117BQ6P1L5 589 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 ZNF720Q7Z2F6 126 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 SPRED2Q7Z698 418 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 SFR1Q86XK3 245 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 FAM178BQ8IXR5 827 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 MYRIPQ8NFW9 859 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 KIF18AQ8NI77 898 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 SPIRE2Q8WWL2 714 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 MYLIPQ8WY64 445 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 PPP1R13BQ96KQ4 1090 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 FIZ1Q96SL8 496 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 SH2D3AQ9BRG2 576 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 NTPCRQ9BSD7 190 aaKnown RBP7.72□□□□□ -1.17
VPS11-201ENST00000524454 TUBB2BQ9BVA1 445 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 RUSC1Q9BVN2 902 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 VPS16Q9H269 839 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 MRPL44Q9H9J2 332 aaKnown RBP7.72□□□□□ -1.17
VPS11-201ENST00000524454 PLCB1Q9NQ66 1216 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 ZNF302Q9NR11 478 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 MTMR10Q9NXD2 777 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 GABBR1Q9UBS5 961 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 PLAGL2Q9UPG8 496 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 SIK3Q9Y2K2 1263 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 SLC4A7Q9Y6M7 1214 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 ARID2Q68CP9 1835 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 NRCAMQ92823 1304 aa7.72□□□□□ -1.17
VPS11-201ENST00000524454 IGKV6D-21A0A0A0MT36 114 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 ZBTB42B2RXF5 422 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 DYNC1I1O14576 645 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 KIAA0391O15091 583 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 P4HA2O15460 535 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 GAS2O43903 313 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 DGAT1O75907 488 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CHRNA1P02708 482 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CXCL10P02778 98 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 PFKMP08237 780 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 GHRP10912 638 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 EPB41P11171 864 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 GNAT1P11488 350 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 ACTN1P12814 892 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 PLS3P13797 630 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 TNNT1P13805 278 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 KRT9P35527 623 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 SLC26A2P50443 739 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 NCKAP1LP55160 1127 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 WDR5P61964 334 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 ETF1P62495 437 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 TUBB4BP68371 445 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 KRT83P78385 493 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 GTF2BQ00403 316 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 MAPK7Q13164 816 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 ADAM9Q13443 819 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CTTNQ14247 550 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 GRIN2CQ14957 1233 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CCDC40Q4G0X9 1142 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 HSP90AA4PQ58FG1 418 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 XKR3Q5GH77 459 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 ODR4Q5SWX8 454 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 FAM160B1Q5W0V3 765 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CEP135Q66GS9 1140 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CNKSR3Q6P9H4 555 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms