RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 PDE6CP51160 858 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 MAP3K10Q02779 954 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 PGM5Q15124 567 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 UBAP2Q5T6F2 1119 aaKnown RBP11.89□□□□□ -0.51
HDAC9-228ENST00000524023 PLA2G4FQ68DD2 849 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 CCDC121Q6ZUS5 278 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
HDAC9-228ENST00000524023 ART4Q93070 314 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 RAVER2Q9HCJ3 691 aaKnown RBP11.89□□□□□ -0.51
HDAC9-228ENST00000524023 HOMER2Q9NSB8 354 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 ANKEF1Q9NU02 776 aa11.89□□□□□ -0.51
HDAC9-228ENST00000524023 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 PHF20L1A8MW92 1017 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 WDR64B1ANS9 1081 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CCNE2O96020 404 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 DRD4P21917 467 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 NPTX2P47972 431 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 SMTNP53814 917 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RWDD2BP57060 319 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CPLX4Q7Z7G2 160 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CACNA2D3Q8IZS8 1091 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 FBXL13Q8NEE6 735 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 TAS1R2Q8TE23 839 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 DDX1Q92499 740 aaKnown RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 HVCN1Q96D96 273 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CABS1Q96KC9 395 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 NT5C1BQ96P26 610 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 TMEM109Q9BVC6 243 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 KIFC3Q9BVG8 833 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 FAM129AQ9BZQ8 928 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 ADAM7Q9H2U9 754 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 AZI2Q9H6S1 392 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 SLC38A10Q9HBR0 1119 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 MAP3K20Q9NYL2 800 aaKnown RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 COL4A5P29400 1685 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 DENND3A2RUS2 1198 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 MYCLP12524 364 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RARGP13631 454 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CHN1P15882 459 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 KCNJ1P48048 391 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 JAK3P52333 1124 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 ADCY2Q08462 1091 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 GKAP1Q5VSY0 366 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 ACAD10Q6JQN1 1059 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 NSMFQ6X4W1 530 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RNF207Q6ZRF8 634 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CROCCP2Q86T23 111 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CCDC13Q8IYE1 715 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 LARGE2Q8N3Y3 721 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 PSPC1Q8WXF1 523 aaKnown RBP11.88□□□□□ -0.51
HDAC9-228ENST00000524023 CHMP6Q96FZ7 201 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 MFSD14AQ96MC6 490 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 FBXL18Q96ME1 805 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 OSBPL7Q9BZF2 842 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 TAOK3Q9H2K8 898 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
HDAC9-228ENST00000524023 SMIM23A6NLE4 172 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 RIPK2O43353 540 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
HDAC9-228ENST00000524023 AGTP01019 485 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 FGFR4P22455 802 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 SFNP31947 248 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 IFI35P80217 286 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-228ENST00000524023 KRT76Q01546 638 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 DMP1Q13316 513 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-228ENST00000524023 SLC39A4Q6P5W5 647 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 ANO5Q75V66 913 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 SAMD3Q8N6K7 520 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 DHX38Q92620 1227 aaKnown RBP11.87□□□□□ -0.51
HDAC9-228ENST00000524023 LPAR1Q92633 364 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 KIFAP3Q92845 792 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 PDCD2LQ9BRP1 358 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 LRRC19Q9H756 370 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 ACTR5Q9H9F9 607 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-228ENST00000524023 KMT5AQ9NQR1 393 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 TCEAL9Q9UHQ7 104 aa11.87□□□□□ -0.51
HDAC9-228ENST00000524023 FSCN2O14926 492 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 CLDN3O15551 220 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 ECEL1O95672 775 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 GTF2H1P32780 548 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 CYP24A1Q07973 514 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 DGKZQ13574 1117 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 CLEC16AQ2KHT3 1053 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 SV2AQ7L0J3 742 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 UHMK1Q8TAS1 419 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms