RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 RXFP1Q9HBX9 757 aa13.63□□□□□ -0.23
VEGFA-223ENST00000523125 PTPRHQ9HD43 1115 aa13.63□□□□□ -0.23
VEGFA-223ENST00000523125 ARHGAP28Q9P2N2 729 aa13.63□□□□□ -0.23
VEGFA-223ENST00000523125 ADAM28Q9UKQ2 775 aa13.63□□□□□ -0.23
VEGFA-223ENST00000523125 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 TEX28O15482 410 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 NR1I2O75469 434 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 URODP06132 367 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 GLUD2P49448 558 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 SLC12A3P55017 1021 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 TUSC3Q13454 348 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
VEGFA-223ENST00000523125 TMEM132AQ24JP5 1023 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 TMEM119Q4V9L6 283 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 ATF7IP2Q5U623 682 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 KIAA1841Q6NSI8 718 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 KCTD17Q8N5Z5 321 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 FBXL18Q96ME1 805 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 NECTIN4Q96NY8 510 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 PLIN2Q99541 437 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 ACO2Q99798 780 aaKnown RBP13.62□□□□□ -0.23
VEGFA-223ENST00000523125 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 NTPCRQ9BSD7 190 aaKnown RBP13.62□□□□□ -0.23
VEGFA-223ENST00000523125 TNFSF13BQ9Y275 285 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 GDAQ9Y2T3 454 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 DOCK8Q8NF50 2099 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
VEGFA-223ENST00000523125 CASTOR2A6NHX0 329 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 ABLIM1O14639 778 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 THP07101 528 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 SP100P23497 879 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-223ENST00000523125 MTHFRP42898 656 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 GRIN1Q05586 938 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 DMP1Q13316 513 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-223ENST00000523125 HSP90AA2PQ14568 343 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-223ENST00000523125 ARSHQ5FYA8 562 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 TMC5Q6UXY8 1006 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 HFE2Q6ZVN8 426 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 GPR149Q86SP6 731 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 CABP7Q86V35 215 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 GPR65Q8IYL9 337 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
VEGFA-223ENST00000523125 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 C17orf75Q9HAS0 396 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-223ENST00000523125 SSX2IPQ9Y2D8 614 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 RBM19Q9Y4C8 960 aaKnown RBP13.61□□□□□ -0.23
VEGFA-223ENST00000523125 KMT2EQ8IZD2 1858 aa13.61□□□□□ -0.23
VEGFA-223ENST00000523125 C2CD4DB7Z1M9 353 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 SLC16A4O15374 487 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 TADA2AO75478 443 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 KIF4AO95239 1232 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 ADH1AP07327 375 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 PROZP22891 400 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 IGFBP6P24592 240 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-223ENST00000523125 ZXDAP98168 799 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 CEP120Q8N960 986 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 TMEM161BQ8NDZ6 487 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 AK8Q96MA6 479 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 PPP1R10Q96QC0 940 aaKnown RBP13.6□□□□□ -0.23
VEGFA-223ENST00000523125 CDT1Q9H211 546 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 SFXN1Q9H9B4 322 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 NR2E1Q9Y466 385 aa13.6□□□□□ -0.23
VEGFA-223ENST00000523125 ARIH1Q9Y4X5 557 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-223ENST00000523125 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 SLC26A4O43511 780 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 PAPLNO95428 1278 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 BRD1O95696 1058 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 PLS3P13797 630 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 GRM5P41594 1212 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
VEGFA-223ENST00000523125 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 LILRA6Q6PI73 481 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 PRSS55Q6UWB4 352 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-223ENST00000523125 CD300LGQ6UXG3 332 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 SPIRE2Q8WWL2 714 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-223ENST00000523125 CDK5RAP3Q96JB5 506 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
VEGFA-223ENST00000523125 MAN1C1Q9NR34 630 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms