RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 C2orf16Q68DN1 1984 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 VWA3AA6NCI4 1184 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 TMEM221A6NGB7 291 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 K7ERI5 159 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 M0R296 226 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 TADA2AO75478 443 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 EFNA5P52803 228 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 DSG1Q02413 1049 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 TUSC3Q13454 348 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 ATF7IP2Q5U623 682 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 RINT1Q6NUQ1 792 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 GLYCTKQ8IVS8 523 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 DAW1Q8N136 415 aa22.8■■□□□ 1.24
SDCBP-209ENST00000522243 SFI1A8K8P3 1242 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 ADH1AP07327 375 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 NPTX2P47972 431 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 HSP90AA2PQ14568 343 aaPredicted RBP22.79■■□□□ 1.24
SDCBP-209ENST00000522243 PTPN21Q16825 1174 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 LARP1BQ659C4 914 aaKnown RBP22.79■■□□□ 1.24
SDCBP-209ENST00000522243 PNMA5Q96PV4 448 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 MAN1C1Q9NR34 630 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 CHST7Q9NS84 486 aa22.79■■□□□ 1.24
SDCBP-209ENST00000522243 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.79■■□□□ 1.24
SDCBP-209ENST00000522243 TRIP11Q15643 1979 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 THP07101 528 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 SPATA31D3P0C874 917 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 RAD51AP2Q09MP3 1159 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 MAPK7Q13164 816 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 USP41Q3LFD5 358 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 DCAF4L1Q3SXM0 396 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 SPATA31D4Q6ZUB0 917 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 C1orf186Q6ZWK4 172 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 DENND4AQ7Z401 1863 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 GPR149Q86SP6 731 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 PALB2Q86YC2 1186 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 RIN2Q8WYP3 895 aaPredicted RBP22.78■■□□□ 1.24
SDCBP-209ENST00000522243 PBXIP1Q96AQ6 731 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 RXFP1Q9HBX9 757 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 KMT5AQ9NQR1 393 aa22.78■■□□□ 1.24
SDCBP-209ENST00000522243 ARIH1Q9Y4X5 557 aaPredicted RBP22.78■■□□□ 1.24
SDCBP-209ENST00000522243 MYO10Q9HD67 2058 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 GLUD1P00367 558 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 RPL17P18621 184 aaKnown RBP22.77■■□□□ 1.24
SDCBP-209ENST00000522243 DMP1Q13316 513 aaPredicted RBP22.77■■□□□ 1.24
SDCBP-209ENST00000522243 GLRA4Q5JXX5 417 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 PRSS55Q6UWB4 352 aaPredicted RBP22.77■■□□□ 1.24
SDCBP-209ENST00000522243 TDRD5Q8NAT2 981 aaKnown RBP22.77■■□□□ 1.24
SDCBP-209ENST00000522243 DRC1Q96MC2 740 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 MFSD14AQ96MC6 490 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 TNFSF13BQ9Y275 285 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 MYH11P35749 1972 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 PHLPP2Q6ZVD8 1323 aa22.77■■□□□ 1.24
SDCBP-209ENST00000522243 KIF4AO95239 1232 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 SIGLEC14Q08ET2 396 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 NAB2Q15742 525 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 HYIQ5T013 277 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 TAS1R3Q7RTX0 852 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 CEP120Q8N960 986 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 KREMEN2Q8NCW0 462 aa22.76■■□□□ 1.23
SDCBP-209ENST00000522243 MTCL1Q9Y4B5 1905 aaKnown RBP22.75■■□□□ 1.23
SDCBP-209ENST00000522243 SLC16A4O15374 487 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 ASGR2P07307 311 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 OSTNP61366 133 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 RTP2Q5QGT7 225 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 BMP8AQ7Z5Y6 402 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 CEP57Q86XR8 500 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 CDK5RAP3Q96JB5 506 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 ACO2Q99798 780 aaKnown RBP22.75■■□□□ 1.23
SDCBP-209ENST00000522243 TARS2Q9BW92 718 aaKnown RBP22.75■■□□□ 1.23
SDCBP-209ENST00000522243 SMOC2Q9H3U7 446 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 TMEM134Q9H6X4 195 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 LIMD1Q9UGP4 676 aa22.75■■□□□ 1.23
SDCBP-209ENST00000522243 SF3B1O75533 1304 aaKnown RBP eCLIP22.75■■□□□ 1.23
SDCBP-209ENST00000522243 CCDC195A0A1B0GUA6 201 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 RFPL2O75678 378 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 IGFBP6P24592 240 aaPredicted RBP22.74■■□□□ 1.23
SDCBP-209ENST00000522243 ZNF568Q3ZCX4 644 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 FAM171A1Q5VUB5 890 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 ARL6IP4Q66PJ3 421 aaKnown RBP22.74■■□□□ 1.23
SDCBP-209ENST00000522243 CCDC149Q6ZUS6 474 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 SYT2Q8N9I0 419 aaPredicted RBP22.74■■□□□ 1.23
SDCBP-209ENST00000522243 ASIC4Q96FT7 647 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 MRPL4Q9BYD3 311 aaKnown RBP22.74■■□□□ 1.23
SDCBP-209ENST00000522243 NT5C3AQ9H0P0 336 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 CDT1Q9H211 546 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.74■■□□□ 1.23
SDCBP-209ENST00000522243 ARHGAP28Q9P2N2 729 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 SORCS3Q9UPU3 1222 aa22.74■■□□□ 1.23
SDCBP-209ENST00000522243 TGM5O43548 720 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 PLA2G4BP0C869 781 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 GUCY2CP25092 1073 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 SLC12A3P55017 1021 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 CACNB1Q02641 598 aaPredicted RBP22.73■■□□□ 1.23
SDCBP-209ENST00000522243 C15orf39Q6ZRI6 1047 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 APBB1IPQ7Z5R6 666 aaPredicted RBP22.73■■□□□ 1.23
SDCBP-209ENST00000522243 ZDHHC14Q8IZN3 488 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 PTPRHQ9HD43 1115 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 FNIP2Q9P278 1114 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 USTQ9Y2C2 406 aa22.73■■□□□ 1.23
SDCBP-209ENST00000522243 RBM19Q9Y4C8 960 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms