RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TMC2Q8TDI7 906 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 PPP1R9BQ96SB3 815 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 OSBPL7Q9BZF2 842 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 TLE2Q04725 743 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 PAK2Q13177 524 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 LPIN1Q14693 890 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 DCAF4L1Q3SXM0 396 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 USP37Q86T82 979 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 CEP120Q8N960 986 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 PARD3BQ8TEW8 1205 aa23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 AGO3Q9H9G7 860 aaKnown RBP23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 CPSF3Q9UKF6 684 aaKnown RBP23.23■■□□□ 1.31
R3HCC1-208ENST00000522012 STAG3L1P0CL83 205 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 DLATP10515 647 aaKnown RBP23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 SELPP16109 830 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 CD52P31358 61 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 PSMD6Q15008 389 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 C1orf53Q5VUE5 145 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 SPECC1LQ69YQ0 1117 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 TRAF7Q6Q0C0 670 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 NECAB2Q7Z6G3 386 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 FAM212AQ96EL1 285 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 PCMTD1Q96MG8 357 aaPredicted RBP23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 FNBP1Q96RU3 617 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 POP1Q99575 1024 aaKnown RBP23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 EIF2AQ9BY44 585 aaKnown RBP23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 TRIM6Q9C030 488 aaPredicted RBP23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 PADI3Q9ULW8 664 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 ATP11BQ9Y2G3 1177 aa23.22■■□□□ 1.31
R3HCC1-208ENST00000522012 LRRIQ3A6PVS8 624 aaPredicted RBP23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 CLTAP09496 248 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 PBX1P40424 430 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 RBL2Q08999 1139 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 SYCP1Q15431 976 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 KYAT1Q16773 422 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 LRRC8DQ7L1W4 858 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 BRSK2Q8IWQ3 736 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 TMEM192Q8IY95 271 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 USP38Q8NB14 1042 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 CCDC51Q96ER9 411 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 TOX2Q96NM4 488 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 RPF1Q9H9Y2 349 aaKnown RBP23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 PDE11AQ9HCR9 933 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 ERVK-5Q9HDB9 667 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 SQORQ9Y6N5 450 aa23.21■■□□□ 1.31
R3HCC1-208ENST00000522012 A0A1W2PQC6 194 aa23.2■■□□□ 1.3
R3HCC1-208ENST00000522012 STX10O60499 249 aa23.2■■□□□ 1.3
R3HCC1-208ENST00000522012 FMO5P49326 533 aa23.2■■□□□ 1.3
R3HCC1-208ENST00000522012 FAAP100Q0VG06 881 aa23.2■■□□□ 1.3
R3HCC1-208ENST00000522012 C1orf220Q5T0J3 134 aa23.2■■□□□ 1.3
R3HCC1-208ENST00000522012 TWF2Q6IBS0 349 aaKnown RBP23.2■■□□□ 1.3
R3HCC1-208ENST00000522012 PTMAP06454 111 aaKnown RBP23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 GCLMP48507 274 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 WNT7BP56706 349 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 MCCD1P59942 119 aaPredicted RBP23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 ENPEPQ07075 957 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 PPP3CAQ08209 521 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 ENOX2Q16206 610 aaKnown RBP23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 ERGIC2Q96RQ1 377 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 CRACR2AQ9BSW2 395 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 CHST12Q9NRB3 414 aa23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 TOPORSQ9NS56 1045 aaPredicted RBP23.19■■□□□ 1.3
R3HCC1-208ENST00000522012 CXCL8P10145 99 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 ZSCAN20P17040 1043 aaPredicted RBP23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 TNNI1P19237 187 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 GRM5P41594 1212 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 KLK7P49862 253 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 LRRC26Q2I0M4 334 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 CBWD6Q4V339 395 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 CBWD3Q5JTY5 395 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 CBWD5Q5RIA9 395 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 UBXN11Q5T124 520 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 ACAP3Q96P50 834 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 CCDC94Q9BW85 323 aaPredicted RBP23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 HIPK3Q9H422 1215 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 GOLGA6L6A8MZA4 724 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 PITPNM1O00562 1244 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 EN2P19622 333 aaPredicted RBP23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 MYL7Q01449 175 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 MBTPS1Q14703 1052 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 SURF1Q15526 300 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 LMBRD2Q68DH5 695 aaPredicted RBP23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 SNTG2Q9NY99 539 aa23.18■■□□□ 1.3
R3HCC1-208ENST00000522012 ITIH6Q6UXX5 1313 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 N4BP1O75113 896 aaKnown RBP23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 GTF2H1P32780 548 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 KCNMA1Q12791 1236 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 GBP6Q6ZN66 633 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 CGRRF1Q99675 332 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 APOL6Q9BWW8 343 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 NXF3Q9H4D5 531 aaKnown RBP23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 IMPACTQ9P2X3 320 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 SIK3Q9Y2K2 1263 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 HES2Q9Y543 173 aa23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.17■■□□□ 1.3
R3HCC1-208ENST00000522012 TNRC18O15417 2968 aaPredicted RBP23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 IL18RAPO95256 599 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 MXI1P50539 228 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 CLDN10P78369 228 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 CETN1Q12798 172 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms