RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 KCNN1Q92952 543 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 UHRF1Q96T88 793 aaPredicted RBP11.23□□□□□ -0.61
TRIM35-204ENST00000521283 CCSER1Q9C0I3 900 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 TLE6Q9H808 572 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 GPRC5CQ9NQ84 441 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 CLDND1Q9NY35 253 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 CCDC39Q9UFE4 941 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 ODF2LQ9ULJ1 636 aa11.23□□□□□ -0.61
TRIM35-204ENST00000521283 E9PMD0 336 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 FSCN2O14926 492 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 ZC3H11AO75152 810 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 C1RP00736 705 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 PRKCBP05771 671 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 GALTP07902 379 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 VCANP13611 3396 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 HOXB8P17481 243 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 HYAL1Q12794 435 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 TMEM184AQ6ZMB5 413 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 TMC7Q7Z402 723 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 PPFIBP1Q86W92 1011 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 SMG8Q8ND04 991 aaKnown RBP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 IGSF21Q96ID5 467 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 TCF25Q9BQ70 676 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 MMTAG2Q9BU76 263 aaKnown RBP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 COLEC11Q9BWP8 271 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 NRDE2Q9H7Z3 1164 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 KMT5AQ9NQR1 393 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 DPP7Q9UHL4 492 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 FAN1Q9Y2M0 1017 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
TRIM35-204ENST00000521283 XIRP2A4UGR9 3374 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 REV3LO60673 3130 aa11.22□□□□□ -0.61
TRIM35-204ENST00000521283 A0A087WWV3 80 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 ARL5CA6NH57 179 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 CCDC169A6NNP5 214 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 PLA2G4BP0C869 781 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 PLS3P13797 630 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 DNAJB1P25685 340 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 CDC25AP30304 524 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 NDUFV1P49821 464 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 PEX3P56589 373 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 TFF2Q03403 129 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 GRIK3Q13003 919 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 STRN3Q13033 797 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 COASYQ13057 564 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 ZRSR1Q15695 479 aaKnown RBP11.21□□□□□ -0.61
TRIM35-204ENST00000521283 KYAT1Q16773 422 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 DUSP6Q16828 381 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 TMEM119Q4V9L6 283 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
TRIM35-204ENST00000521283 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 MRPL43Q8N983 215 aaKnown RBP11.21□□□□□ -0.61
TRIM35-204ENST00000521283 LPPQ93052 612 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 CPB2Q96IY4 423 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
TRIM35-204ENST00000521283 MRPL4Q9BYD3 311 aaKnown RBP11.21□□□□□ -0.61
TRIM35-204ENST00000521283 CCDC113Q9H0I3 377 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 TOPORSQ9NS56 1045 aaPredicted RBP11.21□□□□□ -0.61
TRIM35-204ENST00000521283 ARHGAP28Q9P2N2 729 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 TNFSF13BQ9Y275 285 aa11.21□□□□□ -0.61
TRIM35-204ENST00000521283 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.62
TRIM35-204ENST00000521283 BDP1A6H8Y1 2624 aa11.21□□□□□ -0.62
TRIM35-204ENST00000521283 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 HIP1RO75146 1068 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 NPTXRO95502 500 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 SSBP05455 408 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIM35-204ENST00000521283 CTSAP10619 480 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 DDIT3P35638 169 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 NPTX2P47972 431 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 NRIP1P48552 1158 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 SLC12A3P55017 1021 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 ERVFC1P60507 584 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PRR20EP86478 221 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PRR20CP86479 221 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PRR20DP86480 221 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PRR20BP86481 221 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PRR20AP86496 221 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 CREMQ03060 361 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 RESTQ13127 1097 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 SMAD4Q13485 552 aaKnown RBP11.2□□□□□ -0.62
TRIM35-204ENST00000521283 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 ZPBP2Q6X784 338 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 EP400NLQ6ZTU2 488 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
TRIM35-204ENST00000521283 CASP10Q92851 521 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 GAD1Q99259 594 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 EMILIN2Q9BXX0 1053 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms