RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 PER2O15055 1255 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 LINC01565O15544 149 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 MCF2P10911 925 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 LTBRP36941 435 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 OR1G1P47890 313 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 MPZL3Q6UWV2 235 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 FAM178BQ8IXR5 827 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 VPS52Q8N1B4 723 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 DNAJC19Q96DA6 116 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 CHAMP1Q96JM3 812 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 ZBTB45Q96K62 511 aaPredicted RBP22.64■■□□□ 1.21
TRIM35-203ENST00000521253 COL25A1Q9BXS0 654 aaPredicted RBP22.64■■□□□ 1.21
TRIM35-203ENST00000521253 MARCH5Q9NX47 278 aa22.64■■□□□ 1.21
TRIM35-203ENST00000521253 H3BQ06 376 aaPredicted RBP22.63■■□□□ 1.21
TRIM35-203ENST00000521253 TOM1L1O75674 476 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 BMP1P13497 986 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 SCP2P22307 547 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 NMT1P30419 496 aaKnown RBP22.63■■□□□ 1.21
TRIM35-203ENST00000521253 GRM5P41594 1212 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 ADAM15Q13444 863 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 E2F4Q16254 413 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 LEXMQ3ZCV2 418 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 ZPBP2Q6X784 338 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 EFHBQ8N7U6 833 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 ZBP1Q9H171 429 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 ANKFY1Q9P2R3 1169 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 TBX20Q9UMR3 447 aa22.63■■□□□ 1.21
TRIM35-203ENST00000521253 F8W810 466 aa22.62■■□□□ 1.21
TRIM35-203ENST00000521253 HARSP12081 509 aaKnown RBP22.62■■□□□ 1.21
TRIM35-203ENST00000521253 OSTNP61366 133 aa22.62■■□□□ 1.21
TRIM35-203ENST00000521253 DLX2Q07687 328 aaPredicted RBP22.62■■□□□ 1.21
TRIM35-203ENST00000521253 SMC1AQ14683 1233 aaKnown RBP22.62■■□□□ 1.21
TRIM35-203ENST00000521253 DUSP6Q16828 381 aa22.62■■□□□ 1.21
TRIM35-203ENST00000521253 SFR1Q86XK3 245 aa22.62■■□□□ 1.21
TRIM35-203ENST00000521253 MRPL43Q8N983 215 aaKnown RBP22.62■■□□□ 1.21
TRIM35-203ENST00000521253 DHX58Q96C10 678 aa22.62■■□□□ 1.21
TRIM35-203ENST00000521253 BICD1Q96G01 975 aa22.62■■□□□ 1.21
TRIM35-203ENST00000521253 CCDC94Q9BW85 323 aaPredicted RBP22.62■■□□□ 1.21
TRIM35-203ENST00000521253 MYH11P35749 1972 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 C2orf71A6NGG8 1288 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 TBX10O75333 385 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 NR1I2O75469 434 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 THP07101 528 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 CTSAP10619 480 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 GTF2BQ00403 316 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 TUSC3Q13454 348 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 NOLC1Q14978 699 aaKnown RBP eCLIP22.61■■□□□ 1.21
TRIM35-203ENST00000521253 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.61■■□□□ 1.21
TRIM35-203ENST00000521253 AUTS2Q8WXX7 1259 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 CDCA3Q99618 268 aaPredicted RBP22.61■■□□□ 1.21
TRIM35-203ENST00000521253 CACNG4Q9UBN1 327 aa22.61■■□□□ 1.21
TRIM35-203ENST00000521253 DLL1O00548 723 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 HNRNPDLO14979 420 aaKnown RBP22.6■■□□□ 1.21
TRIM35-203ENST00000521253 CLDN3O15551 220 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 CXCL14O95715 111 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 GLP2RO95838 553 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 CA8P35219 290 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 YARSP54577 528 aaKnown RBP22.6■■□□□ 1.21
TRIM35-203ENST00000521253 KRT85P78386 507 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 MCL1Q07820 350 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 NAB2Q15742 525 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 ZC2HC1CQ53FD0 456 aaPredicted RBP22.6■■□□□ 1.21
TRIM35-203ENST00000521253 GLRA4Q5JXX5 417 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 RESP18Q5W5W9 173 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 IQUBQ8NA54 791 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 ADAMTS19Q8TE59 1207 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 LEO1Q8WVC0 666 aaPredicted RBP22.6■■□□□ 1.21
TRIM35-203ENST00000521253 RABGGTAQ92696 567 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 STAMQ92783 540 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 HAPLN2Q9GZV7 340 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 TNMDQ9H2S6 317 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 CUEDC2Q9H467 287 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 ST6GALNAC4Q9H4F1 302 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 TOPORSQ9NS56 1045 aaPredicted RBP22.6■■□□□ 1.21
TRIM35-203ENST00000521253 STK39Q9UEW8 545 aa22.6■■□□□ 1.21
TRIM35-203ENST00000521253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.59■■□□□ 1.21
TRIM35-203ENST00000521253 CASTOR2A6NHX0 329 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 PIGRP01833 764 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 IDEP14735 1019 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 GAP43P17677 238 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 NDUFV1P49821 464 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 LIG4P49917 911 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 RBM10P98175 930 aaKnown RBP22.59■■□□□ 1.21
TRIM35-203ENST00000521253 BMS1Q14692 1282 aaKnown RBP22.59■■□□□ 1.21
TRIM35-203ENST00000521253 ALKAL1Q6UXT8 129 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 ZNF720Q7Z2F6 126 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 MAP4K3Q8IVH8 894 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 VN1R2Q8NFZ6 395 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 ACAP3Q96P50 834 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 PAAF1Q9BRP4 392 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 COLEC11Q9BWP8 271 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 KBTBD4Q9NVX7 518 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 FAM13BQ9NYF5 915 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 CLEC1BQ9P126 229 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 SEL1LQ9UBV2 794 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 ATP6V1DQ9Y5K8 247 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 IRAK3Q9Y616 596 aa22.59■■□□□ 1.21
TRIM35-203ENST00000521253 FRMD3A2A2Y4 597 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 POLR2DO15514 142 aaKnown RBP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 EFEMP2O95967 443 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms