RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 STK10O94804 968 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 ASNSP08243 561 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 CYP2C9P11712 490 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 PLCG1P19174 1290 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 PHKA1P46020 1223 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 ST13P50502 369 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 WDR5P61964 334 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 CCNA1P78396 465 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 TMEM132BQ14DG7 1078 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 TATDN1Q6P1N9 297 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 CNKSR3Q6P9H4 555 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 MCF2L2Q86YR7 1114 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 CCDC146Q8IYE0 955 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 DCLK2Q8N568 766 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 SYTL5Q8TDW5 730 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 DNAAF4Q8WXU2 420 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 GLT1D1Q96MS3 346 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 UPF3BQ9BZI7 483 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 SMOC2Q9H3U7 446 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 ZSWIM4Q9H7M6 989 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 AS3MTQ9HBK9 375 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 TMOD4Q9NZQ9 345 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 HERC5Q9UII4 1024 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 TLR6Q9Y2C9 796 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 DIS3Q9Y2L1 958 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 PCDHGB7Q9Y5F8 929 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 CDK5RAP2Q96SN8 1893 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 TANC1Q9C0D5 1861 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 IGSF10Q6WRI0 2623 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 F6X3S4 739 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 PI15O43692 258 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 PRICKLE3O43900 615 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 GJB5O95377 273 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 GLP2RO95838 553 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 PFKMP08237 780 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 NBPF7P0C2Y1 421 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 IQCF3P0C7M6 154 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 IGFBP6P24592 240 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 ADORA1P30542 326 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 ATXN1P54253 815 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 YARSP54577 528 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 PSMC6P62333 389 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 HTRA4P83105 476 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 BEX3Q00994 111 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 MECOMQ03112 1051 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 ITGA7Q13683 1181 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 RASGRF1Q13972 1273 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 KIR3DS1Q14943 382 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 CLUL1Q15846 466 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 CCDC57Q2TAC2 916 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 SPATS1Q496A3 300 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 CAVIN4Q5BKX8 364 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 WDR78Q5VTH9 848 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 CWF19L1Q69YN2 538 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 CXCL17Q6UXB2 119 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 DEFB128Q7Z7B8 93 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 ADGRA1Q86SQ6 560 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 RPAINQ86UA6 219 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 SUGP1Q8IWZ8 645 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 KIAA2013Q8IYS2 634 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 DAGLBQ8NCG7 672 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 PHC3Q8NDX5 983 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 RIPOR3Q96MK2 946 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 ALDH8A1Q9H2A2 487 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 MTIF3Q9H2K0 278 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 RPAP3Q9H6T3 665 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 TRMT13Q9NUP7 481 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 GGT7Q9UJ14 662 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 MTUS1Q9ULD2 1270 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 DDX49Q9Y6V7 483 aaKnown RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 MYH13Q9UKX3 1938 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 COL11A1P12107 1806 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-208ENST00000521037 MAPK8IP3Q9UPT6 1336 aa4.71□□□□□ -1.66
VPS13B-208ENST00000521037 ZNFX1Q9P2E3 1918 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 CELSR3Q9NYQ7 3312 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 H3BNC9 293 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 STXBP3O00186 592 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 GRM8O00222 908 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 FFAR3O14843 346 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 GH2P01242 217 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ATF4P18848 351 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 RPL10P27635 214 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ICAM3P32942 547 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 LMOD3Q0VAK6 560 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 NEXNQ0ZGT2 675 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ADAM15Q13444 863 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 SMAD4Q13485 552 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 PUM3Q15397 648 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ZYXQ15942 572 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 BBS9Q3SYG4 887 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ZFYVE27Q5T4F4 411 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 CCDC30Q5VVM6 783 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 RPUSD2Q8IZ73 545 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 SUMF1Q8NBK3 374 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 SMRP1Q8NCR6 262 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 RASGRP4Q8TDF6 673 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 SH3RF3Q8TEJ3 882 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 SUSD6Q92537 303 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 NSUN4Q96CB9 384 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms