RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948		H0YCG3	227 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	PPP1R37	O75864	691 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	ASIC1	P78348	528 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	COASY	Q13057	564 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	HERC4	Q5GLZ8	1057 aa	Predicted RBP	19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	CPB2	Q96IY4	423 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	ELAC1	Q9H777	363 aa	Known RBP	19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	DACT1	Q9NYF0	836 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	CNTNAP2	Q9UHC6	1331 aa		19.92	■□□□□ 0.78
VEGFA-222	ENST00000520948	PER2	O15055	1255 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	ZNF623	O75123	536 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	PRR29	P0C7W0	189 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	RBM10	P98175	930 aa	Known RBP	19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	NCBP1	Q09161	790 aa	Known RBP	19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	DPYD	Q12882	1025 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	PRPF4B	Q13523	1007 aa	Known RBP	19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	ZNF598	Q86UK7	904 aa	Known RBP	19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	SMRP1	Q8NCR6	262 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	MICAL1	Q8TDZ2	1067 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	CCDC51	Q96ER9	411 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	FBXL18	Q96ME1	805 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	USP20	Q9Y2K6	914 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	PCDHB12	Q9Y5F1	795 aa		19.91	■□□□□ 0.78
VEGFA-222	ENST00000520948	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	FGFR1	P11362	822 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	NOTUM	Q6P988	496 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	MRPL10	Q7Z7H8	261 aa	Known RBP	19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	ECHDC2	Q86YB7	292 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	ACO2	Q99798	780 aa	Known RBP	19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	FGFBP2	Q9BYJ0	223 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	TLE6	Q9H808	572 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	PTPRH	Q9HD43	1115 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	TBX20	Q9UMR3	447 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	TNFSF13B	Q9Y275	285 aa		19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948	USP15	Q9Y4E8	981 aa	Predicted RBP	19.9	■□□□□ 0.78
VEGFA-222	ENST00000520948		K7ENM7	598 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	ABLIM1	O14639	778 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	FGF18	O76093	207 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	EOMES	O95936	686 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	ATF7	P17544	494 aa	Predicted RBP	19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	ABCD1	P33897	745 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	CASP5	P51878	434 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	NHLH1	Q02575	133 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	TWF2	Q6IBS0	349 aa	Known RBP	19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	THNSL1	Q8IYQ7	743 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	PDZD7	Q9H5P4	517 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	MRPL44	Q9H9J2	332 aa	Known RBP	19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	TLR9	Q9NR96	1032 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	AAAS	Q9NRG9	546 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	FAM105A	Q9NUU6	356 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	TYW1	Q9NV66	732 aa	Known RBP	19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	TMEM161A	Q9NX61	479 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	TBC1D7	Q9P0N9	293 aa		19.89	■□□□□ 0.77
VEGFA-222	ENST00000520948	N4BP3	O15049	544 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	PIGR	P01833	764 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	PROZ	P22891	400 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	RAB27A	P51159	221 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	ERVFC1	P60507	584 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	POSTN	Q15063	836 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	KMT5B	Q4FZB7	885 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	EEF1DP3	Q658K8	133 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	SLC27A1	Q6PCB7	646 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	EPM2AIP1	Q7L775	607 aa	Predicted RBP	19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	CDR2L	Q86X02	465 aa	Predicted RBP	19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	MAP4K3	Q8IVH8	894 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	COLGALT1	Q8NBJ5	622 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	SMG8	Q8ND04	991 aa	Known RBP	19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	VN1R2	Q8NFZ6	395 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	SPATA20	Q8TB22	786 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	HPS3	Q969F9	1004 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	HVCN1	Q96D96	273 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	TARS2	Q9BW92	718 aa	Known RBP	19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	EIF2A	Q9BY44	585 aa	Known RBP	19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	MRPL4	Q9BYD3	311 aa	Known RBP	19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	RNF19A	Q9NV58	838 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	ZNF318	Q5VUA4	2279 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	TECTA	O75443	2155 aa		19.88	■□□□□ 0.77
VEGFA-222	ENST00000520948	RPN1	P04843	607 aa	Known RBP	19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	SKI	P12755	728 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	MRE11	P49959	708 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	UBE3A	Q05086	875 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	STRN3	Q13033	797 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	PSMD2	Q13200	908 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	FAM26F	Q5R3K3	315 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	ATF7IP2	Q5U623	682 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	ZPBP2	Q6X784	338 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	GLIS3	Q8NEA6	775 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	EDA	Q92838	391 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	CCDC34	Q96HJ3	373 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	RNF216	Q9NWF9	866 aa	Predicted RBP	19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	PCDHB2	Q9Y5E7	798 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	PCDHB13	Q9Y5F0	798 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	WDFY4	Q6ZS81	3184 aa		19.87	■□□□□ 0.77
VEGFA-222	ENST00000520948	LOC730098	B7Z3J9	87 aa		19.86	■□□□□ 0.77
VEGFA-222	ENST00000520948	KIN	O60870	393 aa	Known RBP	19.86	■□□□□ 0.77
VEGFA-222	ENST00000520948	RHOBTB3	O94955	611 aa		19.86	■□□□□ 0.77
VEGFA-222	ENST00000520948	MYB	P10242	640 aa		19.86	■□□□□ 0.77
VEGFA-222	ENST00000520948	KCNA1	Q09470	495 aa		19.86	■□□□□ 0.77
VEGFA-222	ENST00000520948	PNOC	Q13519	176 aa		19.86	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms