RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 TSPYL6Q8N831 410 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 ZCCHC14Q8WYQ9 949 aaKnown RBP7.38□□□□□ -1.23
PABPC1-216ENST00000520868 CD244Q9BZW8 370 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 BARX1Q9HBU1 254 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-216ENST00000520868 NDOR1Q9UHB4 597 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 PCDHA9Q9Y5H5 950 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 TNRC18O15417 2968 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-216ENST00000520868 K7ESM1 405 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 SRGAP2CP0DJJ0 459 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 PYGMP11217 842 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 IGHMBP2P38935 993 aaKnown RBP7.37□□□□□ -1.23
PABPC1-216ENST00000520868 NEXNQ0ZGT2 675 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 SMAD2Q15796 467 aaKnown RBP7.37□□□□□ -1.23
PABPC1-216ENST00000520868 PKN2Q16513 984 aaKnown RBP7.37□□□□□ -1.23
PABPC1-216ENST00000520868 SKIDA1Q1XH10 827 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 SPATS1Q496A3 300 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 C2orf27AQ580R0 203 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 TRIM61Q5EBN2 209 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 PHF19Q5T6S3 580 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 STRIP1Q5VSL9 837 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 BTBD8Q5XKL5 378 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 TTLL5Q6EMB2 1281 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 G2E3Q7L622 706 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 KLHL36Q8N4N3 616 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 SH3RF2Q8TEC5 729 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 DNAJC2Q99543 621 aaKnown RBP7.37□□□□□ -1.23
PABPC1-216ENST00000520868 COA1Q9GZY4 146 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 R3HDMLQ9H3Y0 253 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 ARHGAP20Q9P2F6 1191 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 FZD1Q9UP38 647 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 INVSQ9Y283 1065 aa7.37□□□□□ -1.23
PABPC1-216ENST00000520868 MED23Q9ULK4 1368 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 ZNF804BA4D1E1 1349 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 MYO3BQ8WXR4 1341 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 TCRBV5S4A2TA0A5A2 114 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 ZNF839A8K0R7 811 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 PLATP00750 562 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 PDE6AP16499 860 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
PABPC1-216ENST00000520868 KLRK1P26718 216 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 PFKPQ01813 784 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 SREBF2Q12772 1141 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 ARMC9Q7Z3E5 817 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 GSTCDQ8NEC7 633 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 IGDCC4Q8TDY8 1250 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 TSR2Q969E8 191 aaKnown RBP7.36□□□□□ -1.23
PABPC1-216ENST00000520868 MAGEB10Q96LZ2 347 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-216ENST00000520868 STK31Q9BXU1 1019 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 CHMP4AQ9BY43 222 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 MRPL4Q9BYD3 311 aaKnown RBP7.36□□□□□ -1.23
PABPC1-216ENST00000520868 PRKRIP1Q9H875 184 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-216ENST00000520868 SFMBT1Q9UHJ3 866 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 ZFP69BQ9UJL9 534 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 ATP23Q9Y6H3 246 aa7.36□□□□□ -1.23
PABPC1-216ENST00000520868 ZNF609O15014 1411 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 AKAP11Q9UKA4 1901 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 CCDC66A2RUB6 948 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 ACOT7O00154 380 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 SNAP23O00161 211 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 TAF5LO75529 589 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 ITGB3P05106 788 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 KCNJ4P48050 445 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 EFEMP1Q12805 493 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 PKN3Q6P5Z2 889 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 FBXO46Q6PJ61 603 aaPredicted RBP7.35□□□□□ -1.23
PABPC1-216ENST00000520868 OSTM1Q86WC4 334 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 MPHOSPH8Q99549 860 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 ANKRD2Q9GZV1 360 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 RIC8BQ9NVN3 520 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 CBLCQ9ULV8 474 aa7.35□□□□□ -1.23
PABPC1-216ENST00000520868 ZNF536O15090 1300 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 PAPPA2Q9BXP8 1791 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 MAN2B1O00754 1011 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 COL6A1P12109 1028 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 KRT15P19012 456 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 DNM2P50570 870 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 LACTBP83111 547 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 CHRNDQ07001 517 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 DBPQ10586 325 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 NFATC3Q12968 1075 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 GCKRQ14397 625 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 DLGAP5Q15398 846 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 TWISTNBQ3B726 338 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 PTRH1Q86Y79 214 aaKnown RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 APOBEC3FQ8IUX4 373 aaKnown RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 MBD6Q96DN6 1003 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 ZBED3Q96IU2 234 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-216ENST00000520868 DEFB129Q9H1M3 183 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 CD209Q9NNX6 404 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 JAG2Q9Y219 1238 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 PCDHAC2Q9Y5I4 1007 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 PTCH2Q9Y6C5 1203 aa7.34□□□□□ -1.23
PABPC1-216ENST00000520868 CLRN2A0PK11 232 aa7.33□□□□□ -1.24
PABPC1-216ENST00000520868 ANKRD18BA2A2Z9 1011 aa7.33□□□□□ -1.24
PABPC1-216ENST00000520868 LAMTOR5O43504 91 aa7.33□□□□□ -1.24
PABPC1-216ENST00000520868 PLIN1O60240 522 aa7.33□□□□□ -1.24
PABPC1-216ENST00000520868 B4GALT3O60512 393 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms