RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CCDC94Q9BW85 323 aaPredicted RBP17.83■□□□□ 0.44
TNPO1-212ENST00000520850 ZHX3Q9H4I2 956 aa17.83■□□□□ 0.44
TNPO1-212ENST00000520850 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
TNPO1-212ENST00000520850 NGRNQ9NPE2 291 aaKnown RBP17.83■□□□□ 0.44
TNPO1-212ENST00000520850 TLR9Q9NR96 1032 aa17.83■□□□□ 0.44
TNPO1-212ENST00000520850 TOPORSQ9NS56 1045 aaPredicted RBP17.83■□□□□ 0.44
TNPO1-212ENST00000520850 FAN1Q9Y2M0 1017 aa17.83■□□□□ 0.44
TNPO1-212ENST00000520850 PRUNE2Q8WUY3 3088 aa17.83■□□□□ 0.44
TNPO1-212ENST00000520850 FSCN2O14926 492 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 ACTN4O43707 911 aaKnown RBP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 ZC3H11AO75152 810 aaKnown RBP eCLIP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 EFEMP2O95967 443 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 POMCP01189 267 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 THP07101 528 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 PFKFB1P16118 471 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 DNAJB1P25685 340 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 NMT1P30419 496 aaKnown RBP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 SCNN1GP51170 649 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 YARSP54577 528 aaKnown RBP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 BMS1Q14692 1282 aaKnown RBP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.44
TNPO1-212ENST00000520850 GPR65Q8IYL9 337 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 CEP57L1Q8IYX8 460 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 TMEM169Q96HH4 297 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 RPS6KC1Q96S38 1066 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 PLEKHA5Q9HAU0 1116 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 EXOC7Q9UPT5 735 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 IRAK3Q9Y616 596 aa17.82■□□□□ 0.44
TNPO1-212ENST00000520850 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.81■□□□□ 0.44
TNPO1-212ENST00000520850 A0A0B4J269 797 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 A0A1B0GVL5 298 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 PTGESO14684 152 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 NRP1O14786 923 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 HNRNPDLO14979 420 aaKnown RBP17.81■□□□□ 0.44
TNPO1-212ENST00000520850 ADRB2P07550 413 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 IDEP14735 1019 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 KCNE1P15382 129 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 SLC11A1P49279 550 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 LIG4P49917 911 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 EHHADHQ08426 723 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 TUSC3Q13454 348 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 POSTNQ15063 836 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 NAB2Q15742 525 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 STXBP4Q6ZWJ1 553 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 UNC13DQ70J99 1090 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 ATXN2LQ8WWM7 1075 aaKnown RBP17.81■□□□□ 0.44
TNPO1-212ENST00000520850 CHAMP1Q96JM3 812 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 ZBTB45Q96K62 511 aaPredicted RBP17.81■□□□□ 0.44
TNPO1-212ENST00000520850 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 TMEM206Q9H813 350 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 DNAJB4Q9UDY4 337 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 REV3LO60673 3130 aa17.81■□□□□ 0.44
TNPO1-212ENST00000520850 CLTAP09496 248 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 SYKP43405 635 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 COASYQ13057 564 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 CCDC85BQ15834 202 aaPredicted RBP17.8■□□□□ 0.44
TNPO1-212ENST00000520850 ZC2HC1CQ53FD0 456 aaPredicted RBP17.8■□□□□ 0.44
TNPO1-212ENST00000520850 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
TNPO1-212ENST00000520850 STAMQ92783 540 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 BICD1Q96G01 975 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 PAGE5Q96GU1 130 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 PPP1R10Q96QC0 940 aaKnown RBP17.8■□□□□ 0.44
TNPO1-212ENST00000520850 ACCSQ96QU6 501 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 CDCA3Q99618 268 aaPredicted RBP17.8■□□□□ 0.44
TNPO1-212ENST00000520850 COLEC11Q9BWP8 271 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 HAPLN2Q9GZV7 340 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 CHMP5Q9NZZ3 219 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 KLK14Q9P0G3 267 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 CNTN3Q9P232 1028 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 SERTAD1Q9UHV2 236 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 TDRD15B5MCY1 1934 aaKnown RBP17.8■□□□□ 0.44
TNPO1-212ENST00000520850 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
TNPO1-212ENST00000520850 SMIM28A0A1B0GU29 152 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 OGTO15294 1046 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 EIF3DO15371 548 aaKnown RBP eCLIP17.79■□□□□ 0.44
TNPO1-212ENST00000520850 FAM189A1O60320 539 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 B4GALT3O60512 393 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 NDUFA8P51970 172 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 ERVFC1P60507 584 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 SNRPFP62306 86 aaKnown RBP17.79■□□□□ 0.44
TNPO1-212ENST00000520850 PSMD2Q13200 908 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 CTC1Q2NKJ3 1217 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 KANK3Q6NY19 840 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 CD302Q8IX05 232 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 RNF168Q8IYW5 571 aaPredicted RBP17.79■□□□□ 0.44
TNPO1-212ENST00000520850 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
TNPO1-212ENST00000520850 HLA-CQ95604 372 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 PABPC5Q96DU9 382 aaKnown RBP17.79■□□□□ 0.44
TNPO1-212ENST00000520850 UROC1Q96N76 676 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 SLC38A7Q9NVC3 462 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 GDAQ9Y2T3 454 aa17.79■□□□□ 0.44
TNPO1-212ENST00000520850 NT5C1B-RDH14C9J2C7 533 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 KIAA0391O15091 583 aaKnown RBP17.78■□□□□ 0.44
TNPO1-212ENST00000520850 GCNT3O95395 438 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 CTSAP10619 480 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 PBX3P40426 434 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 ASIC1P78348 528 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 SLC10A6Q3KNW5 377 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 TCEAL5Q5H9L2 206 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms