RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RAVER1Q8IY67 606 aaKnown RBP5.31□□□□□ -1.56
SQLE-204ENST00000520493 MYO1HQ8N1T3 1032 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 CBARPQ8N350 705 aaPredicted RBP5.31□□□□□ -1.56
SQLE-204ENST00000520493 ZNF276Q8N554 614 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 COG1Q8WTW3 980 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 HAS1Q92839 578 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 ZG16BQ96DA0 208 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 HOOK2Q96ED9 719 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 RAX2Q96IS3 184 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
SQLE-204ENST00000520493 PSMD1Q99460 953 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 PRRX2Q99811 253 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 ENKD1Q9H0I2 346 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 KCTD10Q9H3F6 313 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 NRDE2Q9H7Z3 1164 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 AASDHPPTQ9NRN7 309 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 ZIM2Q9NZV7 527 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 EVLQ9UI08 416 aaPredicted RBP5.31□□□□□ -1.56
SQLE-204ENST00000520493 CDY2AQ9Y6F7 541 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 GOLGA6CA6NDK9 693 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 GOLGA6BA6NDN3 693 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 PRR5-ARHGAP8B1AHC4 643 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 TRIM24O15164 1050 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 TPD52L2O43399 206 aaKnown RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 CAND2O75155 1236 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 RPS6KA4O75676 772 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 ABLIM3O94929 683 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 GOLGA6DP0CG33 693 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 VCAM1P19320 739 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 LGALS4P56470 323 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 UBE3CQ15386 1083 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 FSCN1Q16658 493 aaKnown RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 PITRM1Q5JRX3 1037 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 TMEM240Q5SV17 173 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 FAM102BQ5T8I3 360 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 CXorf57Q6NSI4 855 aaKnown RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 PDZD4Q76G19 769 aaPredicted RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 DOK3Q7L591 496 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 MSL3Q8N5Y2 521 aaKnown RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 CLRN3Q8NCR9 226 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 TSR2Q969E8 191 aaKnown RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 FUBP3Q96I24 572 aaKnown RBP eCLIP5.3□□□□□ -1.56
SQLE-204ENST00000520493 MYH16Q9H6N6 1097 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 GOLGA6AQ9NYA3 693 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 EIF2B4Q9UI10 523 aaKnown RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 TMPRSS11EQ9UL52 423 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 PNMA8BQ9ULN7 279 aaPredicted RBP5.3□□□□□ -1.56
SQLE-204ENST00000520493 SORCS3Q9UPU3 1222 aa5.3□□□□□ -1.56
SQLE-204ENST00000520493 A0A087X1B8 175 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 LOC102724159A0A0B4J2E5 919 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 TMEM191CA6NGB0 347 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 MAP4K4O95819 1239 aaPredicted RBP5.29□□□□□ -1.56
SQLE-204ENST00000520493 SCGB1D2O95969 90 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 LPLP06858 475 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 RBP3P10745 1247 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 RECQLP46063 649 aaPredicted RBP5.29□□□□□ -1.56
SQLE-204ENST00000520493 SLC25A3Q00325 362 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 TRIM25Q14258 630 aaKnown RBP5.29□□□□□ -1.56
SQLE-204ENST00000520493 PWP2Q15269 919 aaKnown RBP5.29□□□□□ -1.56
SQLE-204ENST00000520493 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.29□□□□□ -1.56
SQLE-204ENST00000520493 C19orf54Q5BKX5 351 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 CT83Q5H943 113 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 GJC2Q5T442 439 aaPredicted RBP5.29□□□□□ -1.56
SQLE-204ENST00000520493 LRCH2Q5VUJ6 765 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 C1QL3Q5VWW1 255 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 FAM180AQ6UWF9 173 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 SSH1Q8WYL5 1049 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 VOPP1Q96AW1 172 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 SMAD5Q99717 465 aaKnown RBP5.29□□□□□ -1.56
SQLE-204ENST00000520493 TRPS1Q9UHF7 1281 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 ZNF180Q9UJW8 692 aa5.29□□□□□ -1.56
SQLE-204ENST00000520493 B5MCH6 92 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 PHF2O75151 1096 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 SNUPNO95149 360 aaKnown RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 GASTP01350 101 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 ENPP1P22413 925 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 IL12RB1P42701 662 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 APBA1Q02410 837 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 VPS72Q15906 364 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 MRGPRGQ86SM5 289 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 C1orf162Q8NEQ5 155 aaPredicted RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 OR52N2Q8NGI0 321 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 ZNF480Q8WV37 535 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 SNX33Q8WV41 574 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 LARP4BQ92615 738 aaKnown RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 EAF2Q96CJ1 260 aaPredicted RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 NUP88Q99567 741 aaPredicted RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 RTFDC1Q9BY42 306 aaPredicted RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 TOPORSQ9NS56 1045 aaPredicted RBP5.28□□□□□ -1.56
SQLE-204ENST00000520493 ZBTB21Q9ULJ3 1066 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 ANKRD6Q9Y2G4 727 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 MRFAP1Q9Y605 127 aa5.28□□□□□ -1.56
SQLE-204ENST00000520493 FZD9O00144 591 aa5.27□□□□□ -1.57
SQLE-204ENST00000520493 RAMP2O60895 175 aa5.27□□□□□ -1.57
SQLE-204ENST00000520493 ITGA10O75578 1167 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms