RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 DUX4L2P0CJ85 424 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 DUX4L3P0CJ86 424 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 DUX4L4P0CJ87 422 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 DUX4L5P0CJ88 424 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 DUX4L6P0CJ89 424 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 DUX4L7P0CJ90 424 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 GPS1Q13098 491 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 GPR162Q16538 588 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 FAM81AQ8TBF8 368 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 SMAD5Q99717 465 aaKnown RBP9.19□□□□□ -0.94
CSMD1-206ENST00000520002 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.19□□□□□ -0.941e-7■□□□□ 9.3
CSMD1-206ENST00000520002 DUX4Q9UBX2 424 aa9.19□□□□□ -0.94
CSMD1-206ENST00000520002 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 CCDC80Q76M96 950 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 BBS2Q9BXC9 721 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 NEDD4P46934 1319 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 DTNAQ9Y4J8 743 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 IFNAR1P17181 557 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 KCNQ4P56696 695 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 C16orf72Q14CZ0 275 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 APLFQ8IW19 511 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 CDHR1Q96JP9 859 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 R3HDM2Q9Y2K5 976 aaKnown RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 CCDC149Q6ZUS6 474 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 TMC4Q7Z404 712 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ERICH1Q86X53 443 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 PPM1NQ8N819 430 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 SUN2Q9UH99 717 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 C15orf41Q9Y2V0 281 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 TMEM2Q9UHN6 1383 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 AKAP10O43572 662 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 MFN2O95140 757 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 PPP4R4Q6NUP7 873 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 MYCBPAPQ8TBZ2 947 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 CNKSR1Q969H4 720 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 VIPAS39Q9H9C1 493 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 GJB4Q9NTQ9 266 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 CDHR2Q9BYE9 1310 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 GRID2IPA4D2P6 1211 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 LRRC53A6NM62 1247 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 NEMP1O14524 444 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 MKRN3Q13064 507 aaKnown RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 CCDC81Q6ZN84 652 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 DAPK2Q9UIK4 370 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 BCORL1Q5H9F3 1711 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 IPO5O00410 1097 aaKnown RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 LRIG3Q6UXM1 1119 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 AIM2O14862 343 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 AHCYL1O43865 530 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ALCAMQ13740 583 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 OASLQ15646 514 aaKnown RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 TMEM270Q6UE05 265 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ZNF555Q8NEP9 628 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 VPS39Q96JC1 886 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 TRPM1Q7Z4N2 1603 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 PRDM15P57071 1507 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ZSCAN9O15535 394 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 TBC1D4O60343 1298 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ZNF699Q32M78 642 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 PRPF39Q86UA1 669 aaKnown RBP9.18□□□□□ -0.94
CSMD1-206ENST00000520002 GANCQ8TET4 914 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 GORASP1Q9BQQ3 440 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ZBTB1Q9Y2K1 713 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 PREX2Q70Z35 1606 aa9.18□□□□□ -0.94
CSMD1-206ENST00000520002 ANKARQ7Z5J8 1434 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 B2RBV5 119 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 SASH1O94885 1247 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 TTC33Q6PID6 262 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-206ENST00000520002 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 ISLR2Q6UXK2 745 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 RHOT2Q8IXI1 618 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 PRCCQ92733 491 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-206ENST00000520002 IL1RAPL1Q9NZN1 696 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 ADAM22Q9P0K1 906 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 LEMD3Q9Y2U8 911 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 MYH9P35579 1960 aaKnown RBP9.17□□□□□ -0.94
CSMD1-206ENST00000520002 ATP4AP20648 1035 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 HADHAP40939 763 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 TSHZ1Q6ZSZ6 1077 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 SPATA4Q8NEY3 305 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 DCUN1D5Q9BTE7 237 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 ARL6IP4Q66PJ3 421 aaKnown RBP9.17□□□□□ -0.94
CSMD1-206ENST00000520002 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 ANKMY2Q8IV38 441 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 VPS11Q9H270 941 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 MID2Q9UJV3 735 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 ABCB11O95342 1321 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 RSBN1Q5VWQ0 802 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-206ENST00000520002 LRRC34Q8IZ02 419 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 SNX19Q92543 992 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 BPIFA3Q9BQP9 254 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 MRPL1Q9BYD6 325 aaKnown RBP9.17□□□□□ -0.94
CSMD1-206ENST00000520002 CCDC188H7C350 402 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 PAMP19021 973 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 C1orf54Q8WWF1 131 aa9.17□□□□□ -0.94
CSMD1-206ENST00000520002 PBXIP1Q96AQ6 731 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms