RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 CNGA4Q8IV77 575 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 FAM126BQ8IXS8 530 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GPD1LQ8N335 351 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PPP1R13LQ8WUF5 828 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GLT1D1Q96MS3 346 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PANX2Q96RD6 677 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ACO2Q99798 780 aaKnown RBP16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TTYH3Q9C0H2 523 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 IFT122Q9HBG6 1241 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PYCARDQ9ULZ3 195 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 MROH7Q68CQ1 1323 aa16.42■□□□□ 0.22
SH3PXD2B-203ENST00000519643 A0A087WZ62 844 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 A0A0B4J269 797 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TTC26A0AVF1 554 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 C17orf102A2RUQ5 167 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 INO80B-WBP1J3KQ70 363 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ARVCFO00192 962 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ACKR2O00590 384 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 NRDCO43847 1150 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 EXTL3O43909 919 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TRIM49P0CI25 452 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TRIM49CP0CI26 452 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GNAT1P11488 350 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 SKILP12757 684 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TRIM21P19474 475 aaKnown RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GPC3P51654 580 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 VAMP7P51809 220 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 FAM187BQ17R55 369 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ZNF410Q86VK4 478 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 C7orf31Q8N865 590 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CCDC51Q96ER9 411 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ZBTB45Q96K62 511 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 FDXACB1Q9BRP7 624 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PPP1R12CQ9BZL4 782 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 INO80BQ9C086 356 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 HAPLN2Q9GZV7 340 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PRMT7Q9NVM4 692 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CAPN11Q9UMQ6 739 aa16.41■□□□□ 0.22
SH3PXD2B-203ENST00000519643 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TOM1L1O75674 476 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 MSNP26038 577 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CYP2C18P33260 490 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 FMO5P49326 533 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 NLRP11P59045 1033 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CDC42EP1Q00587 391 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ENPEPQ07075 957 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PSRC1Q6PGN9 363 aaPredicted RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CXCL17Q6UXB2 119 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GBP6Q6ZN66 633 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 NEK11Q8NG66 645 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 NLRP7Q8WX94 980 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 PPP1R16BQ96T49 567 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 FAM213AQ9BRX8 229 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 CRACR2AQ9BSW2 395 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 MSTO1Q9BUK6 570 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 FAM49AQ9H0Q0 323 aaPredicted RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 ANKFY1Q9P2R3 1169 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 YBX2Q9Y2T7 364 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 GBF1Q92538 1859 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 REV3LO60673 3130 aa16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 TRIP12Q14669 1992 aaPredicted RBP16.4■□□□□ 0.22
SH3PXD2B-203ENST00000519643 A0A0U1RQG5 324 aaPredicted RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 ZNF233A6NK53 670 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 TREHO43280 583 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 LDHAP00338 332 aaKnown RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 CD4P01730 458 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 KRT9P35527 623 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 MATR3P43243 847 aaKnown RBP eCLIP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 ZNF200P98182 395 aaPredicted RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 PRPF4BQ13523 1007 aaKnown RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 CCDC85BQ15834 202 aaPredicted RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 NBPF20Q3BBV1 942 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 C1orf220Q5T0J3 134 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 TSHZ1Q6ZSZ6 1077 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 TMEM139Q8IV31 216 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 TMEM199Q8N511 208 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 TMC2Q8TDI7 906 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 HERVK_113Q902F9 699 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 UHRF1Q96T88 793 aaPredicted RBP16.39■□□□□ 0.21
SH3PXD2B-203ENST00000519643 EDEM3Q9BZQ6 932 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms