RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
CSMD1-205ENST00000519623 KIAA1024Q9UPX6 916 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 PCDHB6Q9Y5E3 794 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 PTGESO14684 152 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 TADA2AO75478 443 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 RFPL2O75678 378 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 GLUD1P00367 558 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 PRKCBP05771 671 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 SPATA31D3P0C874 917 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 MYBP10242 640 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 MRE11P49959 708 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 TUSC3Q13454 348 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
CSMD1-205ENST00000519623 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 EEF1DP3Q658K8 133 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 SPATA31D4Q6ZUB0 917 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 OTOP3Q7RTS5 596 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 PALB2Q86YC2 1186 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 PRRX2Q99811 253 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 KIFC3Q9BVG8 833 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 FNIP2Q9P278 1114 aa13.73□□□□□ -0.21
CSMD1-205ENST00000519623 TRIP11Q15643 1979 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 RECQL4O94761 1208 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 THP07101 528 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 LIG1P18858 919 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 EFNA5P52803 228 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 RIN2Q8WYP3 895 aaPredicted RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 KIFAP3Q92845 792 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 ACSF2Q96CM8 615 aaPredicted RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 PHOX2BQ99453 314 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 WDR6Q9NNW5 1121 aaKnown RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 DDX19AQ9NUU7 478 aaKnown RBP13.72□□□□□ -0.21
CSMD1-205ENST00000519623 DPP7Q9UHL4 492 aa13.72□□□□□ -0.21
CSMD1-205ENST00000519623 DOCK6Q96HP0 2047 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 PP2D1A8MPX8 630 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 E9PMD0 336 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 TGM5O43548 720 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
CSMD1-205ENST00000519623 CDC25AP30304 524 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 PTPN5P54829 565 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 RTP2Q5QGT7 225 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.21
CSMD1-205ENST00000519623 DAW1Q8N136 415 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 CLSTN3Q9BQT9 956 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 MMTAG2Q9BU76 263 aaKnown RBP13.71□□□□□ -0.21
CSMD1-205ENST00000519623 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 KCNK12Q9HB15 430 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.71□□□□□ -0.21
CSMD1-205ENST00000519623 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.21
CSMD1-205ENST00000519623 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
CSMD1-205ENST00000519623 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
CSMD1-205ENST00000519623 DOCK8Q8NF50 2099 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 K7ERI5 159 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 LAD1O00515 517 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 KIF4AO95239 1232 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 IGFBP6P24592 240 aaPredicted RBP13.7□□□□□ -0.22
CSMD1-205ENST00000519623 PRPHP41219 470 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 RABEP1Q15276 862 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 TMEM132AQ24JP5 1023 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 ATF7IP2Q5U623 682 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 ELMSAN1Q6PJG2 1045 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 C1orf186Q6ZWK4 172 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 KCNK18Q7Z418 384 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 LNX1Q8TBB1 728 aaPredicted RBP13.7□□□□□ -0.22
CSMD1-205ENST00000519623 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
CSMD1-205ENST00000519623 TTPALQ9BTX7 342 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 RAB34Q9BZG1 259 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 DNM3Q9UQ16 869 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 GDAQ9Y2T3 454 aa13.7□□□□□ -0.22
CSMD1-205ENST00000519623 HIP1RO75146 1068 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 NPTX2P47972 431 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 NUBP1P53384 320 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 PEX3P56589 373 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 CREMQ03060 361 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 MAPK7Q13164 816 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 TDGQ13569 410 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 DCAF4L1Q3SXM0 396 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms