RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-215ENST00000519474 DDIT3P35638 169 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 LONP1P36776 959 aaKnown RBP10.28□□□□□ -0.76
HDAC3-215ENST00000519474 PTPN14Q15678 1187 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 ALKAL1Q6UXT8 129 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 C12orf76Q8N812 135 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-215ENST00000519474 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 CASP10Q92851 521 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 EPSTI1Q96J88 318 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 DRC1Q96MC2 740 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 ADPGKQ9BRR6 497 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 TIPINQ9BVW5 301 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 TARS2Q9BW92 718 aaKnown RBP10.28□□□□□ -0.76
HDAC3-215ENST00000519474 C11orf16Q9NQ32 467 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 GDAQ9Y2T3 454 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 SRPRBQ9Y5M8 271 aaKnown RBP10.28□□□□□ -0.76
HDAC3-215ENST00000519474 VCANP13611 3396 aa10.28□□□□□ -0.76
HDAC3-215ENST00000519474 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 LOC730098B7Z3J9 87 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 GPR37L1O60883 481 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 NR1I2O75469 434 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 RECQL4O94761 1208 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 PLS3P13797 630 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 PROZP22891 400 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 KLRC2P26717 231 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CA8P35219 290 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CACNB1Q02641 598 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 GRIK3Q13003 919 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 DHX8Q14562 1220 aaKnown RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 MCM6Q14566 821 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 KARSQ15046 597 aaKnown RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 XKR4Q5GH76 650 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CD300LGQ6UXG3 332 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CEP120Q8N960 986 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 TMEM161BQ8NDZ6 487 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CALML4Q96GE6 196 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CDK5RAP3Q96JB5 506 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CLIC6Q96NY7 704 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 LRFN3Q9BTN0 628 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 PHF7Q9BWX1 381 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 C1QTNF1Q9BXJ1 281 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 ADAM7Q9H2U9 754 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 RXFP1Q9HBX9 757 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 MRPL17Q9NRX2 175 aaKnown RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 KCND2Q9NZV8 630 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 STK39Q9UEW8 545 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 KCNG1Q9UIX4 513 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 CDH22Q9UJ99 828 aa10.27□□□□□ -0.77
HDAC3-215ENST00000519474 FBXO2Q9UK22 296 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 SPTBN5Q9NRC6 3674 aaKnown RBP10.27□□□□□ -0.77
HDAC3-215ENST00000519474 C2CD2LO14523 706 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 MEFVO15553 781 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 STX6O43752 255 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 TADA2AO75478 443 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 PLCG1P19174 1290 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 CLCN4P51793 760 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 SMTNP53814 917 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 DSG1Q02413 1049 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 CEBPZQ03701 1054 aaKnown RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 DMP1Q13316 513 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 TUSC3Q13454 348 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 CBX2Q14781 532 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 SLC39A14Q15043 492 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 DCAF4L1Q3SXM0 396 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 FUT10Q6P4F1 479 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 LILRA6Q6PI73 481 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 ZBTB33Q86T24 672 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 RNF135Q8IUD6 432 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 GPR65Q8IYL9 337 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 RAD54LQ92698 747 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 KCNN1Q92952 543 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 B3GALT6Q96L58 329 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 PPP1R10Q96QC0 940 aaKnown RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 USP28Q96RU2 1077 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 RPS6KC1Q96S38 1066 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 HERC2P3Q9BVR0 1158 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 MRPL4Q9BYD3 311 aaKnown RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 HAPLN2Q9GZV7 340 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 CDT1Q9H211 546 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 ZSCAN16Q9H4T2 348 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 TSHZ2Q9NRE2 1034 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 TFIP11Q9UBB9 837 aaKnown RBP10.26□□□□□ -0.77
HDAC3-215ENST00000519474 ADAM28Q9UKQ2 775 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 SSX2IPQ9Y2D8 614 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 XIRP2A4UGR9 3374 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 ZMYM2Q9UBW7 1377 aa10.26□□□□□ -0.77
HDAC3-215ENST00000519474 SMIM28A0A1B0GU29 152 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 CASTOR2A6NHX0 329 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 TEX28O15482 410 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 BRD1O95696 1058 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 WEE2P0C1S8 567 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 SRGAP2BP0DMP2 458 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 MAPTP10636 758 aaKnown RBP10.25□□□□□ -0.77
HDAC3-215ENST00000519474 ALADP13716 330 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 GRM5P41594 1212 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 OSTNP61366 133 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 ITIH3Q06033 890 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 USP41Q3LFD5 358 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 RARS2Q5T160 578 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms