RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	CFI	P05156	583 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	PFKM	P08237	780 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	POU3F2	P20265	443 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	GPR15	P49685	360 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	RARRES1	P49788	294 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	NHLH1	Q02575	133 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	PPARA	Q07869	468 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	BMS1	Q14692	1282 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	NFE2L2	Q16236	605 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877		Q6ZNX1	250 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	GPR149	Q86SP6	731 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	EFHB	Q8N7U6	833 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	MDM1	Q8TC05	714 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	CHTF18	Q8WVB6	975 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	ALOXE3	Q9BYJ1	711 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	ALG13	Q9NP73	1137 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	TMEM260	Q9NX78	707 aa		4.04	□□□□□ -1.76
PCM1-208	ENST00000518877	LRRC3C	A6NJW4	275 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	ITGA10	O75578	1167 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	LTA4H	P09960	611 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	ZNF81	P51508	661 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	CHN2	P52757	468 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	SRSF4	Q08170	494 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	SF3A1	Q15459	793 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	BMT2	Q1RMZ1	405 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	CCDC178	Q5BJE1	867 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	PDZD4	Q76G19	769 aa	Predicted RBP	4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	MAPKAPK5	Q8IW41	473 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	NEU1	Q99519	415 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	CASS4	Q9NQ75	786 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	THG1L	Q9NWX6	298 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	TMPRSS11E	Q9UL52	423 aa		4.03	□□□□□ -1.76
PCM1-208	ENST00000518877	PRSS38	A1L453	326 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	LCHN	A4D1U4	455 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	DRGX	A6NNA5	263 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	MGST3	O14880	152 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	KPNA6	O60684	536 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	CACNA2D1	P54289	1103 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	MRPS35	P82673	323 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	C21orf62-AS1	Q17RA5	79 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	GPR158	Q5T848	1215 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	LYSMD2	Q8IV50	215 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	ZNF366	Q8N895	744 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	OR56A1	Q8NGH5	318 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	ACTRT2	Q8TDY3	377 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	RNF31	Q96EP0	1072 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	KLK15	Q9H2R5	256 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	KMT5A	Q9NQR1	393 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	TBCCD1	Q9NVR7	557 aa		4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	COL3A1	P02461	1466 aa	Predicted RBP	4.02	□□□□□ -1.77
PCM1-208	ENST00000518877	SCAP	Q12770	1279 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	AKNAD1	Q5T1N1	836 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	AGAP9	Q5VTM2	703 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	TSHZ3	Q63HK5	1081 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	METRNL	Q641Q3	311 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	ABHD15	Q6UXT9	468 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	SLC41A1	Q8IVJ1	513 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	TMEM132C	Q8N3T6	1108 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	ZNF610	Q8N9Z0	462 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	CEP95	Q96GE4	821 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	MRFAP1L1	Q96HT8	127 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	HEPH	Q9BQS7	1158 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	REXO4	Q9GZR2	422 aa	Known RBP	4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	MS4A5	Q9H3V2	200 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	ASB6	Q9NWX5	421 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	SLC17A6	Q9P2U8	582 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	NUMBL	Q9Y6R0	609 aa		4.01	□□□□□ -1.77
PCM1-208	ENST00000518877	C1QL1	O75973	258 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	ELANE	P08246	267 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	CANX	P27824	592 aa	Known RBP	4	□□□□□ -1.77
PCM1-208	ENST00000518877	NEK4	P51957	841 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	CLRN1	P58418	232 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	PHC1	P78364	1004 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	LRRTM3	Q86VH5	581 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	RHOT2	Q8IXI1	618 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	SYNPO	Q8N3V7	929 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	SMC1B	Q8NDV3	1235 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	SNX33	Q8WV41	574 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	ANKS1A	Q92625	1134 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	RNPC3	Q96LT9	517 aa	Known RBP	4	□□□□□ -1.77
PCM1-208	ENST00000518877	ZNF778	Q96MU6	729 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	ZSWIM1	Q9BR11	485 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	PRDM12	Q9H4Q4	367 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	ZSWIM4	Q9H7M6	989 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	GPRC5D	Q9NZD1	345 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	FOXJ2	Q9P0K8	574 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	EVL	Q9UI08	416 aa	Predicted RBP	4	□□□□□ -1.77
PCM1-208	ENST00000518877	CD2AP	Q9Y5K6	639 aa		4	□□□□□ -1.77
PCM1-208	ENST00000518877	PROP1	O75360	226 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	GAST	P01350	101 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	FLT3LG	P49771	235 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	KPNA1	P52294	538 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	RAP2B	P61225	183 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	MEF2A	Q02078	507 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	TERF2	Q15554	542 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	C19orf54	Q5BKX5	351 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	MFSD14B	Q5SR56	506 aa		3.99	□□□□□ -1.77
PCM1-208	ENST00000518877	PRAMEF14	Q5SWL7	426 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms