RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 COL26A1Q96A83 441 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 ELSPBP1Q96BH3 223 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 CCDC51Q96ER9 411 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 RWDD1Q9H446 243 aaPredicted RBP11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 IFT122Q9HBG6 1241 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 HEBP1Q9NRV9 189 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 POLIQ9UNA4 740 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 SF3B1O75533 1304 aaKnown RBP eCLIP11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 RALGAPA1Q6GYQ0 2036 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 GAS7O60861 476 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 AXLP30530 894 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 NUCB1Q02818 461 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 NCBP1Q09161 790 aaKnown RBP11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 PABPC1LQ4VXU2 614 aaKnown RBP11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 C1orf228Q6PIY5 440 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 CCDC12Q8WUD4 166 aaPredicted RBP11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 IRF7Q92985 503 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 LOXL4Q96JB6 756 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 CEP89Q96ST8 783 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 TEKT3Q9BXF9 490 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 GPR62Q9BZJ7 368 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 TRPV5Q9NQA5 729 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 NDRG2Q9UN36 371 aaKnown RBP11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 GIT1Q9Y2X7 761 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 PPME1Q9Y570 386 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 COL4A3BPQ9Y5P4 624 aa11.01□□□□□ -0.65
SH2D4A-202ENST00000518040 CNOT1A5YKK6 2376 aaKnown RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 ZMYM2Q9UBW7 1377 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 COL4A3Q01955 1670 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 ESYT2A0FGR8 921 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 CCL16O15467 120 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 TADA2AO75478 443 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 PAPSS2O95340 614 aaPredicted RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 HOXA11P31270 313 aaPredicted RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 NTHL1P78549 312 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 UGCGQ16739 394 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 UBXN11Q5T124 520 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 ZNF687Q8N1G0 1237 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 REXO1Q8N1G1 1221 aaKnown RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 SPEM1Q8N4L4 309 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 ITFG1Q8TB96 612 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 MAP4K1Q92918 833 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 MSANTD3Q96H12 275 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 GAD1Q99259 594 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 BRD9Q9H8M2 597 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 LMAN1LQ9HAT1 526 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 C6orf50Q9HD87 102 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 AVENQ9NQS1 362 aaPredicted RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 MRPS23Q9Y3D9 190 aaKnown RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 IPPQ9Y573 584 aa11□□□□□ -0.65
SH2D4A-202ENST00000518040 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
SH2D4A-202ENST00000518040 FASNP49327 2511 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 HRO43593 1189 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 ERLIN2O94905 339 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 KCNK5O95279 499 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 ZNF806P0C7X5 589 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 RPL17P18621 184 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 GNA11P29992 359 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 MLH1P40692 756 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 SCNN1GP51170 649 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 MLLT6P55198 1093 aaPredicted RBP10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 ELAVL2Q12926 359 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 LRCH2Q5VUJ6 765 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 NOTUMQ6P988 496 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 CEP68Q76N32 757 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 MIER3Q7Z3K6 550 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 SMG8Q8ND04 991 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 EXOC6Q8TAG9 804 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 SLC7A3Q8WY07 619 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 PIK3R5Q8WYR1 880 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 FAM3CQ92520 227 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 B3GALT6Q96L58 329 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 TTPALQ9BTX7 342 aa10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 LSM14BQ9BX40 385 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-202ENST00000518040 ASPMQ8IZT6 3477 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 ASAP2O43150 1006 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 CHMP2AO43633 222 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 DKC1O60832 514 aaKnown RBP eCLIP10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 GRIK3Q13003 919 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 LRRC32Q14392 662 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 AXDND1Q5T1B0 1012 aaPredicted RBP10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 KSR1Q8IVT5 923 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 FAM160A2Q8N612 972 aaPredicted RBP10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 PSPC1Q8WXF1 523 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 SLC5A5Q92911 643 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 LENG9Q96B70 501 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 CLSTN3Q9BQT9 956 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 TRMT61BQ9BVS5 477 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 ANKRD11Q6UB99 2663 aaPredicted RBP10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 SHISA7A6NL88 538 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 C1QTNF9BB2RNN3 333 aa10.98□□□□□ -0.65
SH2D4A-202ENST00000518040 MSH4O15457 936 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms