RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 TGFAP01135 160 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 IGKV1-17P01599 117 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CD4P01730 458 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ANGP03950 147 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HMGCRP04035 888 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 A1BGP04217 495 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 IGKV3-11P04433 115 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SERPING1P05155 500 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 NEFLP07196 543 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HOXD4P09016 255 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SNRPCP09234 159 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 MAPTP10636 758 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 GZMAP12544 262 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HOXB1P14653 301 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZNF10P21506 573 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 BMP5P22003 454 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SCP2P22307 547 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CPT2P23786 658 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 AXLP30530 894 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HOXA13P31271 388 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ABCD1P33897 745 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 GJA4P35212 333 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HMGCLP35914 325 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TRIM23P36406 574 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 FLT3P36888 993 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 IL6STP40189 918 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 GP5P40197 560 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 BCL6P41182 706 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PTGER2P43116 358 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 RGRP47804 291 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SOX9P48436 509 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 POU3F4P49335 361 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CDK7P50613 346 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SCNN1BP51168 640 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZNF84P51523 738 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CYP2J2P51589 502 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 FOSBP53539 338 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 GAS1P54826 345 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 NRG3P56975 720 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HUNKP57058 714 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 LOXL3P58215 753 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 BTG1P62324 171 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 RPS27AP62979 156 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TMPRSS15P98073 1019 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ATP8B2P98198 1209 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ROR2Q01974 943 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZBTB16Q05516 673 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 NNTQ13423 1086 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 OLIG2Q13516 323 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PEX6Q13608 980 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 DYRK1AQ13627 763 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 RUNX3Q13761 415 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZNF234Q14588 700 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HLXQ14774 488 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PCOLCEQ15113 449 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TBR1Q16650 682 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 MAN2A1Q16706 1144 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PTPN21Q16825 1174 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CCDC142Q17RM4 750 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CLEC16AQ2KHT3 1053 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 AAK1Q2M2I8 961 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CTC1Q2NKJ3 1217 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TMEM44Q2T9K0 475 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 KIF19Q2TAC6 998 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 DEFB112Q30KQ8 113 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZNF750Q32MQ0 723 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PLPPR5Q32ZL2 321 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 XKR7Q5GH72 579 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZNF311Q5JNZ3 666 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 OTUD3Q5T2D3 398 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 STXBP5Q5T5C0 1151 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 HES3Q5TGS1 186 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 GFI1BQ5VTD9 330 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ANKRD22Q5VYY1 191 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 KANK2Q63ZY3 851 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 B3GNTL1Q67FW5 361 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 CTRB2Q6GPI1 263 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TTBK2Q6IQ55 1244 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PRPF40BQ6NWY9 871 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 FAAP20Q6NZ36 180 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZNF585AQ6P3V2 769 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TMED8Q6PL24 325 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 USP17L2Q6R6M4 530 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 C19orf48Q6RUI8 117 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 IL27RAQ6UWB1 636 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PI16Q6UXB8 463 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TFAP2EQ6VUC0 442 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SOSTDC1Q6X4U4 206 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 GIGYF2Q6Y7W6 1299 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 SLC39A5Q6ZMH5 540 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 MEX3BQ6ZN04 569 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 QSOX2Q6ZRP7 698 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 FCRLAQ7L513 359 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 DOK3Q7L591 496 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 OTOP1Q7RTM1 612 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TAS1R1Q7RTX1 841 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 ZC3HAV1Q7Z2W4 902 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 TIPARPQ7Z3E1 657 aaKnown RBP-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 KRT28Q7Z3Y7 464 aa-0.69□□□□□ -2.52
SCARNA17-201ENST00000516183 PRSS42Q7Z5A4 293 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms