RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 CLDN3O15551 220 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 CXCL14O95715 111 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 THP07101 528 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 PROZP22891 400 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 GRM5P41594 1212 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 NRIP1P48552 1158 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 SMC1AQ14683 1233 aaKnown RBP21.24■□□□□ 0.99
LMNA-225ENST00000515824 CTC1Q2NKJ3 1217 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 IQUBQ8NA54 791 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 CDCA3Q99618 268 aaPredicted RBP21.24■□□□□ 0.99
LMNA-225ENST00000515824 COLEC11Q9BWP8 271 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 PRG3Q9Y2Y8 225 aaPredicted RBP21.24■□□□□ 0.99
LMNA-225ENST00000515824 PLXNA4Q9HCM2 1894 aa21.24■□□□□ 0.99
LMNA-225ENST00000515824 MYH15Q9Y2K3 1946 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 FSD2A1L4K1 749 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 GAP43P17677 238 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 CA8P35219 290 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 GTF2F1P35269 517 aaKnown RBP eCLIP21.23■□□□□ 0.99
LMNA-225ENST00000515824 LIG4P49917 911 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 GTF2BQ00403 316 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 AMPD3Q01432 767 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 ADAM15Q13444 863 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 EFHBQ8N7U6 833 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 MRPL43Q8N983 215 aaKnown RBP21.23■□□□□ 0.99
LMNA-225ENST00000515824 DHX58Q96C10 678 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 ZBTB45Q96K62 511 aaPredicted RBP21.23■□□□□ 0.99
LMNA-225ENST00000515824 ACAP3Q96P50 834 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 TNMDQ9H2S6 317 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 TOPORSQ9NS56 1045 aaPredicted RBP21.23■□□□□ 0.99
LMNA-225ENST00000515824 ANKFY1Q9P2R3 1169 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 SEL1LQ9UBV2 794 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 MYH11P35749 1972 aa21.23■□□□□ 0.99
LMNA-225ENST00000515824 PER2O15055 1255 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 HARSP12081 509 aaKnown RBP21.22■□□□□ 0.99
LMNA-225ENST00000515824 IDEP14735 1019 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 NMT1P30419 496 aaKnown RBP21.22■□□□□ 0.99
LMNA-225ENST00000515824 MATR3P43243 847 aaKnown RBP eCLIP21.22■□□□□ 0.99
LMNA-225ENST00000515824 OSTNP61366 133 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 TUSC3Q13454 348 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 E2F4Q16254 413 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 LEXMQ3ZCV2 418 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 CEP120Q8N960 986 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 TMEM87AQ8NBN3 555 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 BCL7CQ8WUZ0 217 aaPredicted RBP21.22■□□□□ 0.99
LMNA-225ENST00000515824 DNAJC19Q96DA6 116 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 SPATA32Q96LK8 384 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 FIZ1Q96SL8 496 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 ST6GALNAC4Q9H4F1 302 aa21.22■□□□□ 0.99
LMNA-225ENST00000515824 HIDE1A8MVS5 230 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 ABLIM1O14639 778 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 PTGESO14684 152 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 HNRNPDLO14979 420 aaKnown RBP21.21■□□□□ 0.99
LMNA-225ENST00000515824 CTSAP10619 480 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 BMP1P13497 986 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 LTBRP36941 435 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 KCNQ1P51787 676 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 MCL1Q07820 350 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 NOLC1Q14978 699 aaKnown RBP eCLIP21.21■□□□□ 0.99
LMNA-225ENST00000515824 DUSP6Q16828 381 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 PUS10Q3MIT2 529 aaKnown RBP21.21■□□□□ 0.99
LMNA-225ENST00000515824 RESP18Q5W5W9 173 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 ZNF720Q7Z2F6 126 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 SFR1Q86XK3 245 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 LEO1Q8WVC0 666 aaPredicted RBP21.21■□□□□ 0.99
LMNA-225ENST00000515824 PYM1Q9BRP8 204 aaKnown RBP21.21■□□□□ 0.99
LMNA-225ENST00000515824 ZBP1Q9H171 429 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 MRPL44Q9H9J2 332 aaKnown RBP21.21■□□□□ 0.99
LMNA-225ENST00000515824 MARCH5Q9NX47 278 aa21.21■□□□□ 0.99
LMNA-225ENST00000515824 C2orf71A6NGG8 1288 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 H3BQ06 376 aaPredicted RBP21.2■□□□□ 0.98
LMNA-225ENST00000515824 DLL1O00548 723 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 POLR2DO15514 142 aaKnown RBP21.2■□□□□ 0.98
LMNA-225ENST00000515824 LINC01565O15544 149 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 PIGRP01833 764 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 NDUFV1P49821 464 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 NUCB2P80303 420 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 HERC4Q5GLZ8 1057 aaPredicted RBP21.2■□□□□ 0.98
LMNA-225ENST00000515824 CCDC65Q8IXS2 484 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 STAMQ92783 540 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 COL25A1Q9BXS0 654 aaPredicted RBP21.2■□□□□ 0.98
LMNA-225ENST00000515824 SCAND2PQ9GZW5 306 aaPredicted RBP21.2■□□□□ 0.98
LMNA-225ENST00000515824 PANK4Q9NVE7 773 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 KBTBD4Q9NVX7 518 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 IRAK3Q9Y616 596 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 VCANP13611 3396 aa21.2■□□□□ 0.98
LMNA-225ENST00000515824 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.19■□□□□ 0.98
LMNA-225ENST00000515824 TADA2AO75478 443 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 SOD2P04179 222 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 HSP90AA2PQ14568 343 aaPredicted RBP21.19■□□□□ 0.98
LMNA-225ENST00000515824 ZC2HC1CQ53FD0 456 aaPredicted RBP21.19■□□□□ 0.98
LMNA-225ENST00000515824 GLRA4Q5JXX5 417 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 ADALQ6DHV7 355 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 ALKAL1Q6UXT8 129 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 MAP4K3Q8IVH8 894 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.19■□□□□ 0.98
LMNA-225ENST00000515824 HVCN1Q96D96 273 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 VN1R3Q9BXE9 311 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 CXCL16Q9H2A7 254 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 MAGEF1Q9HAY2 307 aa21.19■□□□□ 0.98
LMNA-225ENST00000515824 SSX2IPQ9Y2D8 614 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms