RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	NPEPPS	P55786	919 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	SHC2	P98077	582 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	LAMTOR4	Q0VGL1	99 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	AAMP	Q13685	434 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	ACAP1	Q15027	740 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	CREB3L3	Q68CJ9	461 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	CEP57	Q86XR8	500 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	HASPIN	Q8TF76	798 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	PRPF31	Q8WWY3	499 aa	Known RBP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	PSPC1	Q8WXF1	523 aa	Known RBP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	SLC7A3	Q8WY07	619 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	TMEM143	Q96AN5	459 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	CPB2	Q96IY4	423 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	PLA2G2F	Q9BZM2	168 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	NXF3	Q9H4D5	531 aa	Known RBP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	ZFYVE26	Q68DK2	2539 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	KLF18	A0A0U1RQI7	1052 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	ADAM12	O43184	909 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	EDIL3	O43854	480 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	TSPAN1	O60635	241 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	ECI2	O75521	394 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	GNA11	P29992	359 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	CCR3	P51677	355 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	SRSF5	Q13243	272 aa	Known RBP	11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	PSMD5	Q16401	504 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	NOTUM	Q6P988	496 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	ZNF687	Q8N1G0	1237 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	RNF149	Q8NC42	400 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	DNASE1L2	Q92874	299 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	MCRS1	Q96EZ8	462 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	CLSTN3	Q9BQT9	956 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	TTPAL	Q9BTX7	342 aa		11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	LSG1	Q9H089	658 aa	Known RBP	11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	DNMT3B	Q9UBC3	853 aa	Known RBP	11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	MRPS23	Q9Y3D9	190 aa	Known RBP	11.71	□□□□□ -0.53
CLDND1-231	ENST00000515620	CNOT1	A5YKK6	2376 aa	Known RBP	11.71	□□□□□ -0.54
CLDND1-231	ENST00000515620	TDRD15	B5MCY1	1934 aa	Known RBP	11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	CHURC1-FNTB	B4DL54	471 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	AKAP5	P24588	427 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	FNTB	P49356	437 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	PSMC5	P62195	406 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	SATB1	Q01826	763 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	GRIK3	Q13003	919 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	GRM2	Q14416	872 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	SLC5A9	Q2M3M2	681 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	AASDH	Q4L235	1098 aa	Predicted RBP	11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	HACE1	Q8IYU2	909 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	ZNF579	Q8NAF0	562 aa	Known RBP	11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	BICD2	Q8TD16	824 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	PIK3R5	Q8WYR1	880 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	CCDC51	Q96ER9	411 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	CEP170P1	Q96L14	293 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	PAAF1	Q9BRP4	392 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	IER2	Q9BTL4	223 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	TRIM6	Q9C030	488 aa	Predicted RBP	11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	BRD9	Q9H8M2	597 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	KLK14	Q9P0G3	267 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	KCNH3	Q9ULD8	1083 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	GIT1	Q9Y2X7	761 aa		11.7	□□□□□ -0.54
CLDND1-231	ENST00000515620	FRY	Q5TBA9	3013 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	CASTOR2	A6NHX0	329 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	MAN2B1	O00754	1011 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	HR	O43593	1189 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	FOXD2	O60548	495 aa	Predicted RBP	11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	KIF4A	O95239	1232 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	TDP2	O95551	362 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	PROS1	P07225	676 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	POU2F2	P09086	479 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	CEBPB	P17676	345 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	ADD1	P35611	737 aa	Known RBP	11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	NECTIN1	Q15223	517 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	FAM171A1	Q5VUB5	890 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	TANGO2	Q6ICL3	276 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	B3GNT9	Q6UX72	402 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	MAMSTR	Q6ZN01	415 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	GSTCD	Q8NEC7	633 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	LNX1	Q8TBB1	728 aa	Predicted RBP	11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	ELSPBP1	Q96BH3	223 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	CSRNP2	Q9H175	543 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	DHX33	Q9H6R0	707 aa	Known RBP	11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	LMAN1L	Q9HAT1	526 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	GDE1	Q9NZC3	331 aa		11.69	□□□□□ -0.54
CLDND1-231	ENST00000515620	INO80B-WBP1	J3KQ70	363 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	RHO	P08100	348 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	FCAR	P24071	287 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	AXL	P30530	894 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	RFC5	P40937	340 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	CXCL12	P48061	93 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	USP11	P51784	963 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	NCBP1	Q09161	790 aa	Known RBP	11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	EMC2	Q15006	297 aa		11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620	SF3A2	Q15428	464 aa	Known RBP	11.68	□□□□□ -0.54
CLDND1-231	ENST00000515620		Q4G0T1	1027 aa		11.68	□□□□□ -0.54

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