RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 NR1I2O75469 434 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 MYBP10242 640 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 AFF1P51825 1210 aaKnown RBP28.39■■■□□ 2.14
DDR1-279ENST00000515529 MCL1Q07820 350 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 GRIK3Q13003 919 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 KANK3Q6NY19 840 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 CCDC47Q96A33 483 aaKnown RBP28.39■■■□□ 2.14
DDR1-279ENST00000515529 ACAP3Q96P50 834 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 LMAN2LQ9H0V9 348 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 NRDE2Q9H7Z3 1164 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 ALG13Q9NP73 1137 aaKnown RBP28.39■■■□□ 2.14
DDR1-279ENST00000515529 EXOC1Q9NV70 894 aa28.39■■■□□ 2.14
DDR1-279ENST00000515529 ABLIM1O14639 778 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 PPP1R37O75864 691 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 FGF18O76093 207 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 ITGB1P05556 798 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 PBX3P40426 434 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 KRT17Q04695 432 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 KYAT1Q16773 422 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 SLFN12LQ6IEE8 588 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 ZNF280BQ86YH2 543 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 MAFAQ8NHW3 353 aaPredicted RBP28.38■■■□□ 2.13
DDR1-279ENST00000515529 PUF60Q9UHX1 559 aaKnown RBP28.38■■■□□ 2.13
DDR1-279ENST00000515529 MTCH2Q9Y6C9 303 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 KIAA1671Q9BY89 1806 aa28.38■■■□□ 2.13
DDR1-279ENST00000515529 GRM6O15303 877 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 POU3F3P20264 500 aaPredicted RBP28.37■■■□□ 2.13
DDR1-279ENST00000515529 FAM160A1Q05DH4 1040 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 CEP120Q8N960 986 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 HPS3Q969F9 1004 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 MRPL38Q96DV4 380 aaKnown RBP28.37■■■□□ 2.13
DDR1-279ENST00000515529 TMEM169Q96HH4 297 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 TMEM175Q9BSA9 504 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 MSTO1Q9BUK6 570 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 STRA6Q9BX79 667 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 TMEM206Q9H813 350 aa28.37■■■□□ 2.13
DDR1-279ENST00000515529 CSPG5O95196 566 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 ALDH2P05091 517 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 CASP5P51878 434 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 UBE3AQ05086 875 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 PPM1EQ8WY54 764 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 MIOSQ9NXC5 875 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 DNAJB4Q9UDY4 337 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 FAN1Q9Y2M0 1017 aa28.36■■■□□ 2.13
DDR1-279ENST00000515529 NT5C1B-RDH14C9J2C7 533 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 DDHD2O94830 711 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 PRPF6O94906 941 aaKnown RBP28.35■■■□□ 2.13
DDR1-279ENST00000515529 THP07101 528 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 OR1G1P47890 313 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 SLC11A1P49279 550 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 POSTNQ15063 836 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 FMR1NBQ8N0W7 255 aaPredicted RBP28.35■■■□□ 2.13
DDR1-279ENST00000515529 SLC39A11Q8N1S5 342 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 SPPL3Q8TCT6 385 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 POF1BQ8WVV4 589 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 POMGNT1Q8WZA1 660 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 FGFBP2Q9BYJ0 223 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 CHD7Q9P2D1 2997 aa28.35■■■□□ 2.13
DDR1-279ENST00000515529 HOOK1Q9UJC3 728 aaKnown RBP28.35■■■□□ 2.13
DDR1-279ENST00000515529 OGTO15294 1046 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 EIF3DO15371 548 aaKnown RBP eCLIP28.34■■■□□ 2.13
DDR1-279ENST00000515529 GALTP07902 379 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 CLTAP09496 248 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 PLCB3Q01970 1234 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 CCDC85BQ15834 202 aaPredicted RBP28.34■■■□□ 2.13
DDR1-279ENST00000515529 TIGD5Q53EQ6 642 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 TMEM87AQ8NBN3 555 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 GSTCDQ8NEC7 633 aa28.34■■■□□ 2.13
DDR1-279ENST00000515529 A0A0B4J269 797 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 ANKRD63C9JTQ0 380 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 KCNA1Q09470 495 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 SEZ6Q53EL9 994 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 SLC39A4Q6P5W5 647 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 COLGALT2Q8IYK4 626 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 MICAL1Q8TDZ2 1067 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 SLC39A2Q9NP94 309 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 LZTS1Q9Y250 596 aa28.33■■■□□ 2.13
DDR1-279ENST00000515529 PTGESO14684 152 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 SLC34A2O95436 690 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 RPN1P04843 607 aaKnown RBP28.32■■■□□ 2.12
DDR1-279ENST00000515529 DSC1Q08554 894 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 PSMD2Q13200 908 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 TUSC3Q13454 348 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 BMS1Q14692 1282 aaKnown RBP28.32■■■□□ 2.12
DDR1-279ENST00000515529 KMT5BQ4FZB7 885 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 GLRA4Q5JXX5 417 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 SNX27Q96L92 541 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 HAPLN2Q9GZV7 340 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 RPF1Q9H9Y2 349 aaKnown RBP28.32■■■□□ 2.12
DDR1-279ENST00000515529 TLR9Q9NR96 1032 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 AGO2Q9UKV8 859 aaKnown RBP28.32■■■□□ 2.12
DDR1-279ENST00000515529 PRG3Q9Y2Y8 225 aaPredicted RBP28.32■■■□□ 2.12
DDR1-279ENST00000515529 UBE4BO95155 1302 aa28.32■■■□□ 2.12
DDR1-279ENST00000515529 NRP1O14786 923 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 KLRC4O43908 158 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 B4GALT3O60512 393 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 KINO60870 393 aaKnown RBP28.31■■■□□ 2.12
DDR1-279ENST00000515529 PRR29P0C7W0 189 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 EHHADHQ08426 723 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 GLIS3Q8NEA6 775 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms