RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 MBLAC1A4D2B0 266 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ZNF263O14978 683 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ZSCAN12O43309 604 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 GPR32O75388 356 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 CCDC175P0C221 793 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 MXI1P50539 228 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 MCCD1P59942 119 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-213ENST00000515418 PSMD6Q15008 389 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 KCNA10Q16322 511 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 EPC2Q52LR7 807 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 IRF2BP2Q7Z5L9 587 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 TAS1R2Q8TE23 839 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 CCDC42Q96M95 316 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 SPAG5Q96R06 1193 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 PI4K2AQ9BTU6 479 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ADAMTS10Q9H324 1103 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 KIAA1586Q9HCI6 787 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 UBE2TQ9NPD8 197 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ADAMTS4O75173 837 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 LDHAP00338 332 aaKnown RBP9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ASGR1P07306 291 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ARF4P18085 180 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-213ENST00000515418 PROZP22891 400 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 HOXD10P28358 340 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 JAM2P57087 298 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 CDK17Q00537 523 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 POU5F1BQ06416 359 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 MCL1Q07820 350 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-213ENST00000515418 ZNF568Q3ZCX4 644 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 KRT39Q6A163 491 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 MPZL3Q6UWV2 235 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 TMEM130Q8N3G9 435 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 OR5B17Q8NGF7 314 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 KAT5Q92993 513 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 TATDN2Q93075 761 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 FNBP1Q96RU3 617 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 OSMRQ99650 979 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 NFKBIZQ9BYH8 718 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 TMEM8AQ9HCN3 771 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 AIPL1Q9NZN9 384 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 APEX2Q9UBZ4 518 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 TRIM10Q9UDY6 481 aa9.92□□□□□ -0.82
CPNE4-213ENST00000515418 CASP8AP2Q9UKL3 1982 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 CNTNAP2Q9UHC6 1331 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 FAM170AA1A519 330 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 C17orf102A2RUQ5 167 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 FOXN3O00409 490 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 OGTO15294 1046 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 ZEB2O60315 1214 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 GFPT2O94808 682 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 GFPT1Q06210 699 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 CETN1Q12798 172 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 TDRD12Q587J7 1177 aaKnown RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 SYN2Q92777 582 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 GPR88Q9GZN0 384 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 UPF3AQ9H1J1 476 aaKnown RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 CDT1Q9H211 546 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 HAUS4Q9H6D7 363 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 PRMT7Q9NVM4 692 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-213ENST00000515418 RAB20Q9NX57 234 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 TNFSF13BQ9Y275 285 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 TRIP11Q15643 1979 aa9.91□□□□□ -0.82
CPNE4-213ENST00000515418 SMIM35A0A1B0GVV1 85 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 KIAA0391O15091 583 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 P4HA2O15460 535 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 AKR1B10O60218 316 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 TSPAN1O60635 241 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 FKTNO75072 461 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 N4BP1O75113 896 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 C4BPAP04003 597 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 HMGCRP04035 888 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 SERPING1P05155 500 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 KIF11P52732 1056 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 CLDN10P78369 228 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 PTK2Q05397 1052 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 KLHL30Q0D2K2 578 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 ASIC2Q16515 512 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 FAM187BQ17R55 369 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 SLC9C1Q4G0N8 1177 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 FAM47CQ5HY64 1035 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 TDRD10Q5VZ19 366 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 GDF6Q6KF10 455 aaPredicted RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 SYT10Q6XYQ8 523 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 ZNF571Q7Z3V5 609 aaPredicted RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 USP37Q86T82 979 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 DNAAF5Q86Y56 855 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 CCDC170Q8IYT3 715 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 FBXL13Q8NEE6 735 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 TMEM40Q8WWA1 233 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 KATNAL1Q9BW62 490 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 STK33Q9BYT3 514 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 DEF6Q9H4E7 631 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms