RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 ALDH7A1P49419 539 aaKnown RBP15.59■□□□□ 0.09
NUP54-216ENST00000514901 CASP5P51878 434 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 SNRPFP62306 86 aaKnown RBP15.59■□□□□ 0.09
NUP54-216ENST00000514901 KCNB1Q14721 858 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 KMT5BQ4FZB7 885 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 EPM2AIP1Q7L775 607 aaPredicted RBP15.59■□□□□ 0.09
NUP54-216ENST00000514901 ZNF558Q96NG5 402 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 CDX2Q99626 313 aaPredicted RBP15.59■□□□□ 0.09
NUP54-216ENST00000514901 GTPBP4Q9BZE4 634 aaKnown RBP15.59■□□□□ 0.09
NUP54-216ENST00000514901 PRDM12Q9H4Q4 367 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 MTUS1Q9ULD2 1270 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 GDAQ9Y2T3 454 aa15.59■□□□□ 0.09
NUP54-216ENST00000514901 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 OGTO15294 1046 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 PRPF6O94906 941 aaKnown RBP15.58■□□□□ 0.08
NUP54-216ENST00000514901 KIF20AO95235 890 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 SMC2O95347 1197 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 ALDH2P05091 517 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 POU3F3P20264 500 aaPredicted RBP15.58■□□□□ 0.08
NUP54-216ENST00000514901 POU5F1Q01860 360 aaKnown RBP15.58■□□□□ 0.08
NUP54-216ENST00000514901 GRIK3Q13003 919 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 GPM6BQ13491 265 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 KCNT2Q6UVM3 1135 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 THNSL1Q8IYQ7 743 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 COLGALT1Q8NBJ5 622 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 HPS3Q969F9 1004 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 ZFP42Q96MM3 310 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 GUCD1Q96NT3 240 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 TMEM175Q9BSA9 504 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 MSTO1Q9BUK6 570 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 NRDE2Q9H7Z3 1164 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 SLC39A2Q9NP94 309 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 LMCD1Q9NZU5 365 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 KLK14Q9P0G3 267 aa15.58■□□□□ 0.08
NUP54-216ENST00000514901 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.08
NUP54-216ENST00000514901 RALGAPA2Q2PPJ7 1873 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 ANKRD63C9JTQ0 380 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 KIAA0391O15091 583 aaKnown RBP15.57■□□□□ 0.08
NUP54-216ENST00000514901 RHOBTB3O94955 611 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 POMCP01189 267 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 THP07101 528 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 HARSP12081 509 aaKnown RBP15.57■□□□□ 0.08
NUP54-216ENST00000514901 GARTP22102 1010 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 SCNN1GP51170 649 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 BCAR1P56945 870 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 UBE3AQ05086 875 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 KCNA1Q09470 495 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 PTPROQ16827 1216 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 BMT2Q1RMZ1 405 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 XKR4Q5GH76 650 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 ALKAL1Q6UXT8 129 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 SPRED2Q7Z698 418 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 GSTCDQ8NEC7 633 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 POMGNT1Q8WZA1 660 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 GSDMAQ96QA5 445 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 TSPAN18Q96SJ8 248 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 FGFBP2Q9BYJ0 223 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 HAPLN2Q9GZV7 340 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 GBP3Q9H0R5 595 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 LMAN2LQ9H0V9 348 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 RMND1Q9NWS8 449 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 MIOSQ9NXC5 875 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 STK39Q9UEW8 545 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 AGO2Q9UKV8 859 aaKnown RBP15.57■□□□□ 0.08
NUP54-216ENST00000514901 PLAGL2Q9UPG8 496 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.57■□□□□ 0.08
NUP54-216ENST00000514901 TRANK1O15050 2925 aa15.57■□□□□ 0.08
NUP54-216ENST00000514901 EPOPA6NHQ4 379 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 ZC3H11AO75152 810 aaKnown RBP eCLIP15.56■□□□□ 0.08
NUP54-216ENST00000514901 LDHAP00338 332 aaKnown RBP15.56■□□□□ 0.08
NUP54-216ENST00000514901 GALTP07902 379 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
NUP54-216ENST00000514901 OSTNP61366 133 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 PLCB3Q01970 1234 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 KRT17Q04695 432 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 STK4Q13043 487 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 HSP90AA2PQ14568 343 aaPredicted RBP15.56■□□□□ 0.08
NUP54-216ENST00000514901 HS2ST1Q7LGA3 356 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 ZNF280BQ86YH2 543 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 CD302Q8IX05 232 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 CEP120Q8N960 986 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 KLHL23Q8NBE8 558 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 GOLGA5Q8TBA6 731 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
NUP54-216ENST00000514901 SLC38A7Q9NVC3 462 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 PUF60Q9UHX1 559 aaKnown RBP15.56■□□□□ 0.08
NUP54-216ENST00000514901 LZTS1Q9Y250 596 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 FAN1Q9Y2M0 1017 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 NLRC5Q86WI3 1866 aa15.56■□□□□ 0.08
NUP54-216ENST00000514901 LPXNO60711 386 aa15.55■□□□□ 0.08
NUP54-216ENST00000514901 FGF18O76093 207 aa15.55■□□□□ 0.08
NUP54-216ENST00000514901 DDHD2O94830 711 aa15.55■□□□□ 0.08
NUP54-216ENST00000514901 KCNE1P15382 129 aa15.55■□□□□ 0.08
NUP54-216ENST00000514901 FOSL2P15408 326 aa15.55■□□□□ 0.08
NUP54-216ENST00000514901 ADSSP30520 456 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms