RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 MRPL38Q96DV4 380 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 IFT74Q96LB3 600 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 C11orf84Q9BUA3 381 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 RSAD1Q9HA92 442 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 PRMT7Q9NVM4 692 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 MIOSQ9NXC5 875 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-232ENST00000514755 CNTNAP2Q9UHC6 1331 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 ACKR2O00590 384 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 SPTLC2O15270 562 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 DDHD2O94830 711 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 SKIP12755 728 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 AKAP5P24588 427 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 PPP2R5AQ15172 486 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 KCNT2Q6UVM3 1135 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 GPBP1Q86WP2 473 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 TMEM173Q86WV6 379 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 KCTD17Q8N5Z5 321 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 RASSF8Q8NHQ8 419 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 PGBD4Q96DM1 585 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 ZNF396Q96N95 335 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 REEP2Q9BRK0 252 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 PANK2Q9BZ23 570 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 ZMYND15Q9H091 742 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 CXCL16Q9H2A7 254 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 PDZD7Q9H5P4 517 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 NRDE2Q9H7Z3 1164 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 TBC1D13Q9NVG8 400 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 DNAJB4Q9UDY4 337 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 MYH11P35749 1972 aa12.14□□□□□ -0.47
UBE2D3-232ENST00000514755 TRANK1O15050 2925 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 SLC16A4O15374 487 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 SLC26A4O43511 780 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 FGF18O76093 207 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 BRD1O95696 1058 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 POMCP01189 267 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 ITGA4P13612 1032 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 LAG3P18627 525 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.477e-7■■■□□ 15.7
UBE2D3-232ENST00000514755 MLH1P40692 756 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 TFF2Q03403 129 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 NCBP1Q09161 790 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 PRPF4BQ13523 1007 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 GIT2Q14161 759 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 MAPK6Q16659 721 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 TCEAL5Q5H9L2 206 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 NOMO2Q5JPE7 1267 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 SLC27A1Q6PCB7 646 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 ADGRD2Q7Z7M1 963 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 THNSL1Q8IYQ7 743 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 GSTCDQ8NEC7 633 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 LARP4BQ92615 738 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 DRC1Q96MC2 740 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 ZFP42Q96MM3 310 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 GAD1Q99259 594 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 KMT5AQ9NQR1 393 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
UBE2D3-232ENST00000514755 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 K7ERI5 159 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 PPP6R2O75170 966 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 YEATS4O95619 227 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 PLS3P13797 630 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 DDIT3P35638 169 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 SCNN1GP51170 649 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 BCAR1P56945 870 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 ERVFC1P60507 584 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 PTPROQ16827 1216 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 SHC4Q6S5L8 630 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 SLC39A11Q8N1S5 342 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 PDILTQ8N807 584 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 CEP120Q8N960 986 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 BCL7CQ8WUZ0 217 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 ZNF558Q96NG5 402 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 FIZ1Q96SL8 496 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 TIPINQ9BVW5 301 aa12.12□□□□□ -0.47
UBE2D3-232ENST00000514755 TARS2Q9BW92 718 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms