RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 CBWD1Q9BRT8 395 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 ZFP69BQ9UJL9 534 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 NOL3O60936 208 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 RGS7P49802 495 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SOX10P56693 466 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 ORC1Q13415 861 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SEPT6Q14141 434 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 DBN1Q16643 649 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 MMGT1Q8N4V1 131 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SHCBP1LQ9BZQ2 653 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 CAND2O75155 1236 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 MYBL1P10243 752 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 PON1P27169 355 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 MAPK6Q16659 721 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 TMEM39BQ9GZU3 492 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 NPHS2Q9NP85 383 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 KDM6AO15550 1401 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SPDYE16A6NNV3 312 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 ENO4A6NNW6 628 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 ARL4CP56559 192 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 CORO7P57737 925 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 NOP14P78316 857 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 OVGP1Q12889 678 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 TBX2Q13207 712 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 RBBP5Q15291 538 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 TTLL6Q8N841 843 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 TSEN2Q8NCE0 465 aaKnown RBP13.88□□□□□ -0.19
PRDM16-208ENST00000514189 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 LRRC4Q9HBW1 653 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
PRDM16-208ENST00000514189 MSH4O15457 936 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 RPA1P27694 616 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 ARL4AP40617 200 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 IL1RL1Q01638 556 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 PTGISQ16647 500 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 TMEM259Q4ZIN3 620 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-208ENST00000514189 GBP7Q8N8V2 638 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-208ENST00000514189 TPCN2Q8NHX9 752 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 FBXO41Q8TF61 875 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 ERP27Q96DN0 273 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 AGAP3Q96P47 875 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 TLR10Q9BXR5 811 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 KRT10P13645 584 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 CDH6P55285 790 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 EPHA7Q15375 998 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 HABP4Q5JVS0 413 aaKnown RBP13.87□□□□□ -0.19
PRDM16-208ENST00000514189 CIAPIN1Q6FI81 312 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 CBWD2Q8IUF1 395 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 RHOT1Q8IXI2 618 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 LRRC34Q8IZ02 419 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 SLC20A1Q8WUM9 679 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 DHX38Q92620 1227 aaKnown RBP13.87□□□□□ -0.19
PRDM16-208ENST00000514189 SLC4A9Q96Q91 983 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 TRIM4Q9C037 500 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 ANLNQ9NQW6 1124 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 UBE4BO95155 1302 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 CASQ2O14958 399 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-208ENST00000514189 CREB3O43889 395 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 ARPP19P56211 112 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 PAPD7Q5XG87 772 aaKnown RBP13.87□□□□□ -0.19
PRDM16-208ENST00000514189 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 LCA5Q86VQ0 697 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 POLLQ9UGP5 575 aa13.87□□□□□ -0.19
PRDM16-208ENST00000514189 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 SOX11P35716 441 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 SESN2P58004 480 aaPredicted RBP13.86□□□□□ -0.19
PRDM16-208ENST00000514189 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
PRDM16-208ENST00000514189 TRADDQ15628 312 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 FAXCQ5TGI0 409 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 RNF149Q8NC42 400 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 TRABDQ9H4I3 376 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 CALCAP01258 141 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 APRTP07741 180 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 YY1P25490 414 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 PSMC5P62195 406 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 CCDC93Q567U6 631 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 IL31Q6EBC2 164 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 SPATA21Q7Z572 469 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 SEMA4AQ9H3S1 761 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 FAM187AA6NFU0 413 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 CSDE1O75534 798 aaKnown RBP13.86□□□□□ -0.19
PRDM16-208ENST00000514189 SGPL1O95470 568 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 ARP10275 920 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 CCNYL1Q8N7R7 359 aa13.86□□□□□ -0.19
PRDM16-208ENST00000514189 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms