RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 B4GALT5O43286 388 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 TGFB1I1O43294 461 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 EXOC3O60645 756 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 EOMESO95936 686 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 NR3C1P04150 777 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 HOXD13P35453 343 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 ZNF165P49910 485 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 YARSP54577 528 aaKnown RBP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 NOLC1Q14978 699 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 ZNF568Q3ZCX4 644 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 ANKRD40Q6AI12 368 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 ZBTB33Q86T24 672 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 SLC9A9Q8IVB4 645 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 FAM114A1Q8IWE2 563 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 C12orf56Q8IXR9 622 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 XXYLT1Q8NBI6 393 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 ENOX1Q8TC92 643 aaKnown RBP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 ACAP3Q96P50 834 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 MTIF3Q9H2K0 278 aaKnown RBP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 PDZD7Q9H5P4 517 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 PTPRHQ9HD43 1115 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 RGS18Q9NS28 235 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-214ENST00000513989 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 LRFN2Q9ULH4 789 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 PCDHB7Q9Y5E2 793 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 PCDHB2Q9Y5E7 798 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 STYXL1Q9Y6J8 313 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 SLC4A7Q9Y6M7 1214 aa11.07□□□□□ -0.64
NEDD9-214ENST00000513989 A0A0U1RQF3 1178 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 EPOPA6NHQ4 379 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ZNF233A6NK53 670 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 GOLGA6L19H0YKK7 550 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ENPP3O14638 875 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 OGTO15294 1046 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 EXTL3O43909 919 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ZNF623O75123 536 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 BAIAP3O94812 1187 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 NPTXRO95502 500 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 CLTAP09496 248 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 STAG3L1P0CL83 205 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 EPB41P11171 864 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 HARSP12081 509 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 CDK11BP21127 795 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 PROZP22891 400 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 NR2F2P24468 414 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 PSMC2P35998 433 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 CYP2J2P51589 502 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 STX17P56962 302 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 FAM189BP81408 668 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 TCTN1Q2MV58 587 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 TJAP1Q5JTD0 557 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 SPRED2Q7Z698 418 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 FILIP1Q7Z7B0 1213 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ANKRD20A12PQ8NF67 263 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ZBTB45Q96K62 511 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 GAS2L1Q99501 681 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 TMX1Q9H3N1 280 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 PCIF1Q9H4Z3 704 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 RPF1Q9H9Y2 349 aaKnown RBP11.06□□□□□ -0.64
NEDD9-214ENST00000513989 SLC28A3Q9HAS3 691 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 FAM105AQ9NUU6 356 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 HSPBP1Q9NZL4 362 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 USP20Q9Y2K6 914 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
NEDD9-214ENST00000513989 ZBBXA8MT70 800 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 RFXAPO00287 272 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 IKBKBO14920 756 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 HOXA2O43364 376 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 AMHP03971 560 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 CA3P07451 260 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 TPM2P07951 284 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 ITGA4P13612 1032 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 KRT13P13646 458 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 ADSSP30520 456 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 KCNJ6P48051 423 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 MYL5Q02045 173 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 DSC3Q14574 896 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 SURF1Q15526 300 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 CCDC85BQ15834 202 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-214ENST00000513989 CEP135Q66GS9 1140 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 PPP2R2DQ66LE6 453 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 TTI2Q6NXR4 508 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 CREBRFQ8IUR6 639 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 CD302Q8IX05 232 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms