RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MED15Q96RN5 788 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 GAD1Q99259 594 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 FAM213AQ9BRX8 229 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 TMEM161AQ9NX61 479 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 YBX2Q9Y2T7 364 aaKnown RBP12.37□□□□□ -0.43
HTT-213ENST00000513806 STYXL1Q9Y6J8 313 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 PLXNA4Q9HCM2 1894 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 MYO9BQ13459 2157 aa12.37□□□□□ -0.43
HTT-213ENST00000513806 OGTO15294 1046 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 TLL1O43897 1013 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 EFCAB14O75071 495 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 ZNF623O75123 536 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 OFD1O75665 1012 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 GJB5O95377 273 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 ADRB2P07550 413 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 PTMSP20962 102 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 GRM5P41594 1212 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 CASP4P49662 377 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 SCNN1GP51170 649 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 ENOX2Q16206 610 aaKnown RBP12.36□□□□□ -0.43
HTT-213ENST00000513806 ANKRD40Q6AI12 368 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 LRRC55Q6ZSA7 311 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 CBWD2Q8IUF1 395 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 RABGGTAQ92696 567 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 SLC9A7Q96T83 725 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 MTIF3Q9H2K0 278 aaKnown RBP12.36□□□□□ -0.43
HTT-213ENST00000513806 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
HTT-213ENST00000513806 ATG2AQ2TAZ0 1938 aa12.36□□□□□ -0.43
HTT-213ENST00000513806 SCN1AP35498 2009 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 ARL5CA6NH57 179 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 LACTBL1A8MY62 500 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 DGKIO75912 1065 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 NR3C1P04150 777 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 GARTP22102 1010 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 PBX3P40426 434 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 RAB27AP51159 221 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 TYRO3Q06418 890 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 SLC10A6Q3KNW5 377 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 LMBRD2Q68DH5 695 aaPredicted RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 SCARA3Q6AZY7 606 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 SLFN12LQ6IEE8 588 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 P2RX5Q93086 422 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 PGBD4Q96DM1 585 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 ACAP3Q96P50 834 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 YME1L1Q96TA2 773 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 DUSP9Q99956 384 aaKnown RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 PBX4Q9BYU1 374 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 NKX2-4Q9H2Z4 354 aa12.35□□□□□ -0.43
HTT-213ENST00000513806 ELAC1Q9H777 363 aaKnown RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 CPSF3Q9UKF6 684 aaKnown RBP12.35□□□□□ -0.43
HTT-213ENST00000513806 CHD9Q3L8U1 2897 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 PDXKO00764 312 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 PTGESO14684 152 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 EOMESO95936 686 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 CA3P07451 260 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 SCP2P22307 547 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 CCNE1P24864 410 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 ABCD1P33897 745 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 COBLL1Q53SF7 1204 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 CEP135Q66GS9 1140 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 CENPPQ6IPU0 288 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 GPD1LQ8N335 351 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 GSTCDQ8NEC7 633 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 PLEKHO2Q8TD55 490 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 C18orf25Q96B23 403 aaPredicted RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 SNX27Q96L92 541 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 DNAJC25Q9H1X3 360 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 CERS4Q9HA82 394 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 DNAJB4Q9UDY4 337 aa12.34□□□□□ -0.43
HTT-213ENST00000513806 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 COL4A4P53420 1690 aaPredicted RBP12.34□□□□□ -0.43
HTT-213ENST00000513806 F8W810 466 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 EXTL3O43909 919 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 EXOC3O60645 756 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 DDHD2O94830 711 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 NFICP08651 508 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 SKIP12755 728 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 NR2F2P24468 414 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms