RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 TRIM6Q9C030 488 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-229ENST00000513756 LSG1Q9H089 658 aaKnown RBP13.45□□□□□ -0.26
PTPN20-229ENST00000513756 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
PTPN20-229ENST00000513756 CHRDQ9H2X0 955 aa13.45□□□□□ -0.26
PTPN20-229ENST00000513756 HEBP1Q9NRV9 189 aa13.45□□□□□ -0.26
PTPN20-229ENST00000513756 GDE1Q9NZC3 331 aa13.45□□□□□ -0.26
PTPN20-229ENST00000513756 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
PTPN20-229ENST00000513756 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 CDC27P30260 824 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 RFC5P40937 340 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 SHC2P98077 582 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 COL9A2Q14055 689 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 SIM2Q14190 667 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 PRSS55Q6UWB4 352 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 CEP170P1Q96L14 293 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 CLSTN3Q9BQT9 956 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
PTPN20-229ENST00000513756 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 NAP1L2Q9ULW6 460 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-229ENST00000513756 PMLP29590 882 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 CNR2P34972 360 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 ADD1P35611 737 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 EXOSC10Q01780 885 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 GRIK3Q13003 919 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 HSP90AA2PQ14568 343 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 PSMD5Q16401 504 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 RTP2Q5QGT7 225 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 AXDND1Q5T1B0 1012 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 B3GNT9Q6UX72 402 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 DHX32Q7L7V1 743 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 RNF149Q8NC42 400 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 SLC7A14Q8TBB6 771 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 GJA10Q969M2 543 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 ELSPBP1Q96BH3 223 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 C22orf23Q9BZE7 217 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 RALYQ9UKM9 306 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 NDRG2Q9UN36 371 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 MRPS23Q9Y3D9 190 aaKnown RBP13.43□□□□□ -0.26
PTPN20-229ENST00000513756 HES2Q9Y543 173 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 ZMYM2Q9UBW7 1377 aa13.43□□□□□ -0.26
PTPN20-229ENST00000513756 RALGAPA1Q6GYQ0 2036 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 CNOT1A5YKK6 2376 aaKnown RBP13.42□□□□□ -0.26
PTPN20-229ENST00000513756 PRPF3O43395 683 aaKnown RBP13.42□□□□□ -0.26
PTPN20-229ENST00000513756 TSPAN1O60635 241 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 QARSP47897 775 aaKnown RBP13.42□□□□□ -0.26
PTPN20-229ENST00000513756 NPEPPSP55786 919 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
PTPN20-229ENST00000513756 FERMT3Q86UX7 667 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 CEP57Q86XR8 500 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 LNX1Q8TBB1 728 aaPredicted RBP13.42□□□□□ -0.26
PTPN20-229ENST00000513756 ING5Q8WYH8 240 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 CPB2Q96IY4 423 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 DNMT3BQ9UBC3 853 aaKnown RBP13.42□□□□□ -0.26
PTPN20-229ENST00000513756 CEP295Q9C0D2 2601 aa13.42□□□□□ -0.26
PTPN20-229ENST00000513756 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 EDIL3O43854 480 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 GDF9O60383 454 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 CYP3A7P24462 503 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 CXCL12P48061 93 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 LIMK1P53667 647 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 FGD1P98174 961 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 TFDP1Q14186 410 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 MXD4Q14582 209 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-229ENST00000513756 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-229ENST00000513756 N4BP2L1Q5TBK1 243 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-229ENST00000513756 FAM171A1Q5VUB5 890 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 TBCKQ8TEA7 893 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 FAM3CQ92520 227 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 IRF7Q92985 503 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 TCEANC2Q96MN5 208 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 PLA2G2FQ9BZM2 168 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 NXF3Q9H4D5 531 aaKnown RBP13.41□□□□□ -0.26
PTPN20-229ENST00000513756 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 LMAN1LQ9HAT1 526 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 AVENQ9NQS1 362 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-229ENST00000513756 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
PTPN20-229ENST00000513756 FRYQ5TBA9 3013 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 PROS1P07225 676 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 P4HBP07237 508 aaKnown RBP13.4□□□□□ -0.26
PTPN20-229ENST00000513756 AKAP5P24588 427 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 PTENP60484 403 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 TUSC3Q13454 348 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 RAB33AQ14088 237 aa13.4□□□□□ -0.26
PTPN20-229ENST00000513756 EMC2Q15006 297 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms