RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 DDX12PQ92771 950 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 ZBTB45Q96K62 511 aaPredicted RBP10.66□□□□□ -0.7
RNF4-221ENST00000513643 PPP1R10Q96QC0 940 aaKnown RBP10.66□□□□□ -0.7
RNF4-221ENST00000513643 TCF25Q9BQ70 676 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 ADPGKQ9BRR6 497 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 TRIM6Q9C030 488 aaPredicted RBP10.66□□□□□ -0.7
RNF4-221ENST00000513643 CHST7Q9NS84 486 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 KLK14Q9P0G3 267 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 CFAP45Q9UL16 551 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 TBX20Q9UMR3 447 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 FAN1Q9Y2M0 1017 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 STYXL1Q9Y6J8 313 aa10.66□□□□□ -0.7
RNF4-221ENST00000513643 FAM237AA0A1B0GTK4 181 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 GRXCR2A6NFK2 248 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 F8W810 466 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 LINC01565O15544 149 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 TBX10O75333 385 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 PAPLNO95428 1278 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 KCNE1P15382 129 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 TXLNAP40222 546 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 NRIP1P48552 1158 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 RNASELQ05823 741 aaKnown RBP10.65□□□□□ -0.7
RNF4-221ENST00000513643 COASYQ13057 564 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 TUSC3Q13454 348 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 SKIV2LQ15477 1246 aaKnown RBP10.65□□□□□ -0.7
RNF4-221ENST00000513643 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
RNF4-221ENST00000513643 KIAA0319Q5VV43 1072 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 RESP18Q5W5W9 173 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 SLC39A4Q6P5W5 647 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 MPZL3Q6UWV2 235 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 SV2BQ7L1I2 683 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 TAS1R1Q7RTX1 841 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 MAP4K3Q8IVH8 894 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 VPS52Q8N1B4 723 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 MYCT1Q8N699 235 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 FOXD4L4Q8WXT5 416 aaPredicted RBP10.65□□□□□ -0.7
RNF4-221ENST00000513643 TMEM169Q96HH4 297 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 ZMAT2Q96NC0 199 aaKnown RBP10.65□□□□□ -0.7
RNF4-221ENST00000513643 PANK2Q9BZ23 570 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 CUEDC2Q9H467 287 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 OLFML3Q9NRN5 406 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 SEL1LQ9UBV2 794 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 PARP2Q9UGN5 583 aa10.65□□□□□ -0.7
RNF4-221ENST00000513643 A0A0B4J269 797 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 SMIM28A0A1B0GU29 152 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 FSD2A1L4K1 749 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 PER2O15055 1255 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 FAM13AO94988 1023 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 C1RP00736 705 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 SOD2P04179 222 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 LIG1P18858 919 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 KCNA5P22460 613 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 NMT1P30419 496 aaKnown RBP10.64□□□□□ -0.71
RNF4-221ENST00000513643 ABCD1P33897 745 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 EHHADHQ08426 723 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 DHX8Q14562 1220 aaKnown RBP10.64□□□□□ -0.71
RNF4-221ENST00000513643 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
RNF4-221ENST00000513643 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 ZBTB6Q15916 424 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 SLC10A6Q3KNW5 377 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
RNF4-221ENST00000513643 TMC7Q7Z402 723 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
RNF4-221ENST00000513643 SLC22A17Q8WUG5 538 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 LEO1Q8WVC0 666 aaPredicted RBP10.64□□□□□ -0.71
RNF4-221ENST00000513643 PPP2R3CQ969Q6 453 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 CHAMP1Q96JM3 812 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 SNX27Q96L92 541 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 PAAF1Q9BRP4 392 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 APOL6Q9BWW8 343 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 GBP3Q9H0R5 595 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 S1PR5Q9H228 398 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 TNMDQ9H2S6 317 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 TLE6Q9H808 572 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 RXFP1Q9HBX9 757 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 CLDND1Q9NY35 253 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 CNTN3Q9P232 1028 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 HPSEQ9Y251 543 aa10.64□□□□□ -0.71
RNF4-221ENST00000513643 TTC26A0AVF1 554 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
RNF4-221ENST00000513643 DLL1O00548 723 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 CLASP2O75122 1294 aaKnown RBP10.63□□□□□ -0.71
RNF4-221ENST00000513643 CXCL14O95715 111 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 THP07101 528 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 GAP43P17677 238 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 CMA1P23946 247 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 IGFBP6P24592 240 aaPredicted RBP10.63□□□□□ -0.71
RNF4-221ENST00000513643 ADSSP30520 456 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 STAT6P42226 847 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 OR1G1P47890 313 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
RNF4-221ENST00000513643 POU5F1Q01860 360 aaKnown RBP10.63□□□□□ -0.71
RNF4-221ENST00000513643 DSG1Q02413 1049 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 STRN3Q13033 797 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 ZNF568Q3ZCX4 644 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 ZC2HC1CQ53FD0 456 aaPredicted RBP10.63□□□□□ -0.71
RNF4-221ENST00000513643 PLPP4Q5VZY2 271 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 ADALQ6DHV7 355 aa10.63□□□□□ -0.71
RNF4-221ENST00000513643 SYCE2Q6PIF2 218 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms