RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 AAMPQ13685 434 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 ACAP1Q15027 740 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 N4BP2L1Q5TBK1 243 aaPredicted RBP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 CREB3L3Q68CJ9 461 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 CEP57Q86XR8 500 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 HASPINQ8TF76 798 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 PRPF31Q8WWY3 499 aaKnown RBP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 PSPC1Q8WXF1 523 aaKnown RBP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 TMEM143Q96AN5 459 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 PLA2G2FQ9BZM2 168 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 NAP1L2Q9ULW6 460 aaPredicted RBP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 ZFYVE26Q68DK2 2539 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 KLF18A0A0U1RQI7 1052 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 ADAM12O43184 909 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 EDIL3O43854 480 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 TSPAN1O60635 241 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 ECI2O75521 394 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 GNA11P29992 359 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 CCR3P51677 355 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 SRSF5Q13243 272 aaKnown RBP11.71□□□□□ -0.53
CLDND1-227ENST00000513452 PSMD5Q16401 504 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 NOTUMQ6P988 496 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 RNF149Q8NC42 400 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 DNASE1L2Q92874 299 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 CLSTN3Q9BQT9 956 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 TTPALQ9BTX7 342 aa11.71□□□□□ -0.53
CLDND1-227ENST00000513452 LSG1Q9H089 658 aaKnown RBP11.71□□□□□ -0.53
CLDND1-227ENST00000513452 DNMT3BQ9UBC3 853 aaKnown RBP11.71□□□□□ -0.53
CLDND1-227ENST00000513452 MRPS23Q9Y3D9 190 aaKnown RBP11.71□□□□□ -0.53
CLDND1-227ENST00000513452 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.54
CLDND1-227ENST00000513452 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
CLDND1-227ENST00000513452 CHURC1-FNTBB4DL54 471 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 AKAP5P24588 427 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 FNTBP49356 437 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 PSMC5P62195 406 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 SATB1Q01826 763 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 GRIK3Q13003 919 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 GRM2Q14416 872 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
CLDND1-227ENST00000513452 SLC5A9Q2M3M2 681 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 AASDHQ4L235 1098 aaPredicted RBP11.7□□□□□ -0.54
CLDND1-227ENST00000513452 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
CLDND1-227ENST00000513452 HACE1Q8IYU2 909 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
CLDND1-227ENST00000513452 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 PIK3R5Q8WYR1 880 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 CEP170P1Q96L14 293 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 PAAF1Q9BRP4 392 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 IER2Q9BTL4 223 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 TRIM6Q9C030 488 aaPredicted RBP11.7□□□□□ -0.54
CLDND1-227ENST00000513452 BRD9Q9H8M2 597 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 KLK14Q9P0G3 267 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 KCNH3Q9ULD8 1083 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 GIT1Q9Y2X7 761 aa11.7□□□□□ -0.54
CLDND1-227ENST00000513452 FRYQ5TBA9 3013 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 ANKRD11Q6UB99 2663 aaPredicted RBP11.69□□□□□ -0.54
CLDND1-227ENST00000513452 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 MAN2B1O00754 1011 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 HRO43593 1189 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 FOXD2O60548 495 aaPredicted RBP11.69□□□□□ -0.54
CLDND1-227ENST00000513452 KIF4AO95239 1232 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 TDP2O95551 362 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 PROS1P07225 676 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 POU2F2P09086 479 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 CEBPBP17676 345 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
CLDND1-227ENST00000513452 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 FAM171A1Q5VUB5 890 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 TANGO2Q6ICL3 276 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 B3GNT9Q6UX72 402 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 GSTCDQ8NEC7 633 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 LNX1Q8TBB1 728 aaPredicted RBP11.69□□□□□ -0.54
CLDND1-227ENST00000513452 ELSPBP1Q96BH3 223 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 CSRNP2Q9H175 543 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 DHX33Q9H6R0 707 aaKnown RBP11.69□□□□□ -0.54
CLDND1-227ENST00000513452 LMAN1LQ9HAT1 526 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 GDE1Q9NZC3 331 aa11.69□□□□□ -0.54
CLDND1-227ENST00000513452 INO80B-WBP1J3KQ70 363 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 RHOP08100 348 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 FCARP24071 287 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 AXLP30530 894 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 RFC5P40937 340 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 CXCL12P48061 93 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 USP11P51784 963 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
CLDND1-227ENST00000513452 EMC2Q15006 297 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 SF3A2Q15428 464 aaKnown RBP11.68□□□□□ -0.54
CLDND1-227ENST00000513452 Q4G0T1 1027 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 HEATR6Q6AI08 1181 aaKnown RBP11.68□□□□□ -0.54
CLDND1-227ENST00000513452 POTEHQ6S545 545 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 CEP68Q76N32 757 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms