RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 MIOSQ9NXC5 875 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 CACNG4Q9UBN1 327 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 USP15Q9Y4E8 981 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 HCFC2Q9Y5Z7 792 aa7.15□□□□□ -1.26
KDM3B-208ENST00000512928 MORC2Q9Y6X9 1032 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-208ENST00000512928 K7ENM7 598 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 HAX1O00165 279 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CLASP2O75122 1294 aaKnown RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 TADA2AO75478 443 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 THP07101 528 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CTSAP10619 480 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 PLS3P13797 630 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 GUCY2CP25092 1073 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 GLUD2P49448 558 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 SLC12A3P55017 1021 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 ZP2Q05996 745 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 COASYQ13057 564 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 MAPK7Q13164 816 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 GIT2Q14161 759 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 MCM6Q14566 821 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 STK38Q15208 465 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 PTPN14Q15678 1187 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 SMAD2Q15796 467 aaKnown RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 TPRNQ4KMQ1 711 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 TMEM119Q4V9L6 283 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 HYIQ5T013 277 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 RARS2Q5T160 578 aaKnown RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CES5AQ6NT32 575 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 ANKRD54Q6NXT1 300 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CEP57Q86XR8 500 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 GLYCTKQ8IVS8 523 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 ADHFE1Q8IWW8 467 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 MYCT1Q8N699 235 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 SMRP1Q8NCR6 262 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 RAD54LQ92698 747 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CASP10Q92851 521 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 EPSTI1Q96J88 318 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 MSLNLQ96KJ4 702 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 RPGRIP1Q96KN7 1286 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 B3GALT6Q96L58 329 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CLIC6Q96NY7 704 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 REEP2Q9BRK0 252 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 TIPINQ9BVW5 301 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CCDC94Q9BW85 323 aaPredicted RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 TARS2Q9BW92 718 aaKnown RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 VN1R3Q9BXE9 311 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 C1QTNF1Q9BXJ1 281 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 ZSCAN16Q9H4T2 348 aaPredicted RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 C17orf75Q9HAS0 396 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 MARCH5Q9NX47 278 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 KCND2Q9NZV8 630 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 LARSQ9P2J5 1176 aaKnown RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 STK39Q9UEW8 545 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 CCDC39Q9UFE4 941 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 PRKAG3Q9UGI9 489 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 MTMR6Q9Y217 621 aa7.14□□□□□ -1.27
KDM3B-208ENST00000512928 RBM19Q9Y4C8 960 aaKnown RBP7.14□□□□□ -1.27
KDM3B-208ENST00000512928 SF3B1O75533 1304 aaKnown RBP eCLIP7.13□□□□□ -1.275e-6■■■■□ 20.1
KDM3B-208ENST00000512928 SOD2P04179 222 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 WEE2P0C1S8 567 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 MAPTP10636 758 aaKnown RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 PDIA4P13667 645 aaKnown RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 EPCAMP16422 314 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 LIG4P49917 911 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 DSC1Q08554 894 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 TUSC3Q13454 348 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 HSP90AA2PQ14568 343 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 CBX2Q14781 532 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 SEZ6Q53EL9 994 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ARSHQ5FYA8 562 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 RRAGBQ5VZM2 374 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 FUT10Q6P4F1 479 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 USP49Q70CQ1 688 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 DYMQ7RTS9 669 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 TAS1R1Q7RTX1 841 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 PPFIBP1Q86W92 1011 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 KCTD17Q8N5Z5 321 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 C12orf76Q8N812 135 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 CEP120Q8N960 986 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 KRI1Q8N9T8 703 aaKnown RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 LARP4BQ92615 738 aaKnown RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ZNF396Q96N95 335 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 USP28Q96RU2 1077 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ACO2Q99798 780 aaKnown RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 PAAF1Q9BRP4 392 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 HERC2P3Q9BVR0 1158 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 PANK2Q9BZ23 570 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 CDT1Q9H211 546 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 CXCL16Q9H2A7 254 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 TMEM134Q9H6X4 195 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 PARVGQ9HBI0 331 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 TOPORSQ9NS56 1045 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ARHGAP28Q9P2N2 729 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 KCNG1Q9UIX4 513 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 CDH22Q9UJ99 828 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 FBXO2Q9UK22 296 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ADAM28Q9UKQ2 775 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ODF2LQ9ULJ1 636 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms