RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 SLCO2A1Q92959 643 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 MAGOHBQ96A72 148 aaKnown RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 SH2D3AQ9BRG2 576 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 NUP85Q9BW27 656 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 KIAA1586Q9HCI6 787 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 MTUS1Q9ULD2 1270 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 FER1L6Q2WGJ9 1857 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ATP2A1O14983 1001 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PSAPP07602 524 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 MMEP08473 750 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 KCNA2P16389 499 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 FNTAP49354 379 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 BACE1P56817 501 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PPP2R2AP63151 447 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 MTMR2Q13614 643 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 BYSLQ13895 437 aaKnown RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 MESDQ14696 234 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 SLC39A4Q6P5W5 647 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ZDHHC24Q6UX98 284 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 NSMFQ6X4W1 530 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 C15orf39Q6ZRI6 1047 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 HOOK3Q86VS8 718 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 NLRP14Q86W24 1093 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF677Q86XU0 584 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 SLC13A5Q86YT5 568 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 GPD1LQ8N335 351 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 REPS2Q8NFH8 660 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 OR2W6PQ8NHA6 318 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 TAS1R2Q8TE23 839 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 NSUN6Q8TEA1 469 aaKnown RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 JDP2Q8WYK2 163 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 DHX38Q92620 1227 aaKnown RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 CCDC127Q96BQ5 260 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 TLCD1Q96CP7 247 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PGM2Q96G03 612 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 CEP170P1Q96L14 293 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 CCT8L2Q96SF2 557 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 TMEM109Q9BVC6 243 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 EPB41L4BQ9H329 900 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 CNOT10Q9H9A5 744 aaKnown RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 RNF146Q9NTX7 359 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 GRHL1Q9NZI5 618 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF112Q9UJU3 913 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF862O60290 1169 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 PYGMP11217 842 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 PMS2P54278 862 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 RWDD2BP57060 319 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 EN1Q05925 392 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 CCDC137Q6PK04 289 aaKnown RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 CYFIP1Q7L576 1253 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ARMC9Q7Z3E5 817 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 TADA2BQ86TJ2 420 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ZDHHC14Q8IZN3 488 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 MYCBPAPQ8TBZ2 947 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 BSNDQ8WZ55 320 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 CENPTQ96BT3 561 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 C18orf8Q96DM3 657 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 SAAL1Q96ER3 474 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 C12orf42Q96LP6 360 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 LRRC19Q9H756 370 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 AS3MTQ9HBK9 375 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 AVENQ9NQS1 362 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ARHGAP28Q9P2N2 729 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 GABBR1Q9UBS5 961 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 MTRF1LQ9UGC7 380 aaKnown RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ATP8A1Q9Y2Q0 1164 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 STYXL1Q9Y6J8 313 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 GMNCA6NCL1 334 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 FSCN2O14926 492 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 TRAPPC3O43617 180 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 SPOPO43791 374 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 MYBL1P10243 752 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 UNGP13051 313 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 COILP38432 576 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 MARCKSL1P49006 195 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 CDR1P51861 262 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 PLTPP55058 493 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 BPIFB4P59827 614 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 SLMAPQ14BN4 828 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 SIX1Q15475 284 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 CLEC16AQ2KHT3 1053 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 KRT71Q3SY84 523 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 DCAF15Q66K64 600 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 FBXO25Q8TCJ0 367 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF473Q8WTR7 871 aaKnown RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF653Q96CK0 615 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 ATG4CQ96DT6 458 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 TRIM11Q96F44 468 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 POP1Q99575 1024 aaKnown RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 TRIM31Q9BZY9 425 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 TAOK3Q9H2K8 898 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 PIM2Q9P1W9 311 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 NOVA2Q9UNW9 492 aaKnown RBP9.91□□□□□ -0.82
CPNE4-210ENST00000512332 BCS1LQ9Y276 419 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 RIPK3Q9Y572 518 aa9.91□□□□□ -0.82
CPNE4-210ENST00000512332 PARP14Q460N5 1801 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 MEFVO15553 781 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms