RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ARHGAP8P85298 464 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 ST3GAL2Q16842 350 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 TPRG1Q6ZUI0 275 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 SKAP1Q86WV1 359 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 NPAS3Q8IXF0 933 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 GPR161Q8N6U8 529 aaKnown RBP21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 CXCL16Q9H2A7 254 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 GIT1Q9Y2X7 761 aa21.2■□□□□ 0.98
HMGCS1-206ENST00000511774 C8AP07357 584 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 HNRNPA1P09651 372 aaKnown RBP eCLIP21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 IFNAR1P17181 557 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 ARF4P18085 180 aaPredicted RBP21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 SDHBP21912 280 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 NLRP5P59047 1200 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 MBTD1Q05BQ5 628 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 PPP2R5CQ13362 524 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 ZBTB41Q5SVQ8 909 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 NOTUMQ6P988 496 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 MTSS1LQ765P7 747 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 ZNF687Q8N1G0 1237 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 LNX1Q8TBB1 728 aaPredicted RBP21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 ING5Q8WYH8 240 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 RTKNQ9BST9 563 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 RGL1Q9NZL6 768 aa21.19■□□□□ 0.98
HMGCS1-206ENST00000511774 COL4A2P08572 1712 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 IGFBP6P24592 240 aaPredicted RBP21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 AXLP30530 894 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 RFC5P40937 340 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 AKAP17AQ02040 695 aaKnown RBP21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 MTAPQ13126 283 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 LPAL2Q16609 132 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 PPM1LQ5SGD2 360 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 RSPO2Q6UXX9 243 aaPredicted RBP21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 ASAP3Q8TDY4 903 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 CCDC51Q96ER9 411 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 BORCS6Q96GS4 357 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 PHF20Q9BVI0 1012 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 SH3GLB2Q9NR46 395 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 DNMT3BQ9UBC3 853 aaKnown RBP21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 DDX25Q9UHL0 483 aaKnown RBP21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 PCDHA4Q9UN74 947 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 POLIQ9UNA4 740 aa21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.18■□□□□ 0.98
HMGCS1-206ENST00000511774 RALGAPA1Q6GYQ0 2036 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 NRG2O14511 850 aaPredicted RBP21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 NR1I2O75469 434 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 KIF4AO95239 1232 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 P4HBP07237 508 aaKnown RBP21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 FGD1P98174 961 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 SPEM2Q0P670 501 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 HSP90AA2PQ14568 343 aaPredicted RBP21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 IFNLR1Q8IU57 520 aaPredicted RBP21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 PIK3R5Q8WYR1 880 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 AIFM3Q96NN9 605 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 LXNQ9BS40 222 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 KCNMB3Q9NPA1 279 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 HEBP1Q9NRV9 189 aa21.17■□□□□ 0.98
HMGCS1-206ENST00000511774 ATRXP46100 2492 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 INO80B-WBP1J3KQ70 363 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 ASAP2O43150 1006 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 TBC1D4O60343 1298 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 TADA2AO75478 443 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 NPTXRO95502 500 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 HOXA9P31269 272 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 YWHABP31946 246 aaKnown RBP21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 MAGEA9P43362 315 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 RPS9P46781 194 aaKnown RBP21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 GRIK3Q13003 919 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 CAPSQ13938 189 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 PSMD5Q16401 504 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 INF2Q27J81 1249 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 SLC5A9Q2M3M2 681 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 LIN9Q5TKA1 542 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 FAM171A1Q5VUB5 890 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 MOXD1Q6UVY6 613 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 C4orf19Q8IY42 314 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 BLIDQ8IZY5 108 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 SLC7A14Q8TBB6 771 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 TTPALQ9BTX7 342 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 AGXT2Q9BYV1 514 aa21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 RALYQ9UKM9 306 aaKnown RBP21.16■□□□□ 0.98
HMGCS1-206ENST00000511774 SDK1Q7Z5N4 2213 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 SF3B1O75533 1304 aaKnown RBP eCLIP21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 CASTOR2A6NHX0 329 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 PFKPQ01813 784 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 CREMQ03060 361 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 KRT32Q14532 448 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 XKR9Q5GH70 373 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 CEP57Q86XR8 500 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 TCP11Q8WWU5 503 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 HAS1Q92839 578 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 KCNB2Q92953 911 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 SECISBP2LQ93073 1101 aaKnown RBP21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 DYDC2Q96IM9 177 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
HMGCS1-206ENST00000511774 PTGESO14684 152 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 HMGB1P09429 215 aaKnown RBP21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 PDIA3P30101 505 aaKnown RBP21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 CTTNQ14247 550 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms