RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	INTS8	Q75QN2	995 aa	Known RBP	12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	PPFIBP1	Q86W92	1011 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	VSTM4	Q8IW00	320 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	THNSL1	Q8IYQ7	743 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	CEP120	Q8N960	986 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	PLEKHO2	Q8TD55	490 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	CCDC51	Q96ER9	411 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	ADPGK	Q9BRR6	497 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	EIF2A	Q9BY44	585 aa	Known RBP	12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	TMX1	Q9H3N1	280 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	RTN4	Q9NQC3	1192 aa	Known RBP	12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	CHST12	Q9NRB3	414 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	INTS13	Q9NVM9	706 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	CPSF3	Q9UKF6	684 aa	Known RBP	12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	TBX21	Q9UL17	535 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	UMODL1	Q5DID0	1318 aa		12.82	□□□□□ -0.36
APBB3-217	ENST00000511459	TEX33	O43247	280 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	NPTXR	O95502	500 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	CLTB	P09497	229 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	STAG3L1	P0CL83	205 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	KRT13	P13646	458 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	VAMP7	P51809	220 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	OSTN	P61366	133 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	DLG4	P78352	724 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	UBXN1	Q04323	297 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	PPP2R3A	Q06190	1150 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	BFSP1	Q12934	665 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	TRIM14	Q14142	442 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	GPNMB	Q14956	572 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	DCAF4L1	Q3SXM0	396 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	C1orf220	Q5T0J3	134 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	SPECC1L	Q69YQ0	1117 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	CCDC186	Q7Z3E2	898 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	SLC35C1	Q96A29	364 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	NDST4	Q9H3R1	872 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	HIPK3	Q9H422	1215 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	TMEM39A	Q9NV64	488 aa		12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	RBAK	Q9NYW8	714 aa	Predicted RBP	12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
APBB3-217	ENST00000511459	LGALS16	A8MUM7	142 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	NBN	O60934	754 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	CLTA	P09496	248 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	TRIM49	P0CI25	452 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	TRIM49C	P0CI26	452 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	GRM5	P41594	1212 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	WNT7B	P56706	349 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	POU5F1	Q01860	360 aa	Known RBP	12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	ENPEP	Q07075	957 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	KCNH2	Q12809	1159 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	DSC3	Q14574	896 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	PSMD6	Q15008	389 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	ENOX2	Q16206	610 aa	Known RBP	12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	KYAT1	Q16773	422 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	DCAF17	Q5H9S7	520 aa	Predicted RBP	12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	TCERG1L	Q5VWI1	586 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	ZSCAN30	Q86W11	494 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	TMEM192	Q8IY95	271 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	TMC2	Q8TDI7	906 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	PARD3B	Q8TEW8	1205 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	CCDC127	Q96BQ5	260 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	IQCD	Q96DY2	449 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	WNT8A	Q9H1J5	351 aa		12.8	□□□□□ -0.36
APBB3-217	ENST00000511459	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	MEFV	O15553	781 aa	Predicted RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	MGEA5	O60502	916 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	AFP	P02771	609 aa	Known RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	ZSCAN20	P17040	1043 aa	Predicted RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	CYP2C18	P33260	490 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	CCL23	P55773	120 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	CLDN10	P78369	228 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	PTPN21	Q16825	1174 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	TWF2	Q6IBS0	349 aa	Known RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	BRSK2	Q8IWQ3	736 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	CCDC112	Q8NEF3	446 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	ACAP3	Q96P50	834 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	POP1	Q99575	1024 aa	Known RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	IFIH1	Q9BYX4	1025 aa	Known RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	PPP1R12C	Q9BZL4	782 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	TRIM6	Q9C030	488 aa	Predicted RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	RPF1	Q9H9Y2	349 aa	Known RBP	12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	PDE11A	Q9HCR9	933 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	SNTG2	Q9NY99	539 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	ZKSCAN5	Q9Y2L8	839 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459	ITIH6	Q6UXX5	1313 aa		12.79	□□□□□ -0.36
APBB3-217	ENST00000511459		A0A1W2PQC6	194 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	TRIM43B	A6NCK2	446 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	TULP1	O00294	542 aa	Predicted RBP	12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	KIAA0355	O15063	1070 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	PARN	O95453	639 aa	Known RBP	12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	CXCL8	P10145	99 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	DLAT	P10515	647 aa	Known RBP	12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	PBX1	P40424	430 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	PPP3CA	Q08209	521 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	SURF1	Q15526	300 aa		12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	TSR1	Q2NL82	804 aa	Known RBP	12.78	□□□□□ -0.36
APBB3-217	ENST00000511459	SLC10A6	Q3KNW5	377 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms