RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 COG5Q9UP83 839 aa18.9■□□□□ 0.62
CLDND1-221ENST00000510541 HES2Q9Y543 173 aa18.9■□□□□ 0.62
CLDND1-221ENST00000510541 UBE4BO95155 1302 aa18.9■□□□□ 0.62
CLDND1-221ENST00000510541 RFXAPO00287 272 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 FAM189A1O60320 539 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 NR1I2O75469 434 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 RECQL4O94761 1208 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 THP07101 528 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 IGFBP4P22692 258 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 MLH1P40692 756 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 PSMD2Q13200 908 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 NAB2Q15742 525 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 TMEM132AQ24JP5 1023 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 SPOUT1Q5T280 376 aaKnown RBP18.89■□□□□ 0.61
CLDND1-221ENST00000510541 L1TD1Q5T7N2 865 aaKnown RBP18.89■□□□□ 0.61
CLDND1-221ENST00000510541 CLEC17AQ6ZS10 378 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 THNSL1Q8IYQ7 743 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 TMEM87AQ8NBN3 555 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 POF1BQ8WVV4 589 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 FAM193BQ96PV7 902 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-221ENST00000510541 CDCA3Q99618 268 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-221ENST00000510541 MRPL44Q9H9J2 332 aaKnown RBP18.89■□□□□ 0.61
CLDND1-221ENST00000510541 CNTN3Q9P232 1028 aa18.89■□□□□ 0.61
CLDND1-221ENST00000510541 TDRD15B5MCY1 1934 aaKnown RBP18.89■□□□□ 0.61
CLDND1-221ENST00000510541 PRUNE2Q8WUY3 3088 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 TMEM189-UBE2V1I3L0A0 370 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 PTGESO14684 152 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 HNRNPDLO14979 420 aaKnown RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 OGTO15294 1046 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 DDHD2O94830 711 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 CLTAP09496 248 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 LIG4P49917 911 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 YARSP54577 528 aaKnown RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 COASYQ13057 564 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 TUSC3Q13454 348 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 BMS1Q14692 1282 aaKnown RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 EPM2AIP1Q7L775 607 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 CDR2LQ86X02 465 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 ZNF280BQ86YH2 543 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 UROC1Q96N76 676 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 ACAP3Q96P50 834 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 PPP1R10Q96QC0 940 aaKnown RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 RPS6KC1Q96S38 1066 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 TLR9Q9NR96 1032 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 SLC38A7Q9NVC3 462 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 SNTG2Q9NY99 539 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 CGNQ9P2M7 1197 aaKnown RBP18.88■□□□□ 0.61
CLDND1-221ENST00000510541 EYSQ5T1H1 3165 aa18.88■□□□□ 0.61
CLDND1-221ENST00000510541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-221ENST00000510541 A0A1B0GVL5 298 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 CITO14578 2027 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 ZC3H11AO75152 810 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLDND1-221ENST00000510541 IDEP14735 1019 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 GARTP22102 1010 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 PAX3P23760 479 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 AKAP5P24588 427 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 NMT1P30419 496 aaKnown RBP18.87■□□□□ 0.61
CLDND1-221ENST00000510541 SCNN1GP51170 649 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
CLDND1-221ENST00000510541 NDUFA8P51970 172 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 HSP90AA2PQ14568 343 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-221ENST00000510541 BMT2Q1RMZ1 405 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 CTC1Q2NKJ3 1217 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 ZNF507Q8TCN5 953 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 TMEM169Q96HH4 297 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 SNX27Q96L92 541 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 ZFP42Q96MM3 310 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 TIGD1Q96MW7 591 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 TCHPQ9BT92 498 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 PLXNA4Q9HCM2 1894 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 PARP2Q9UGN5 583 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 FAN1Q9Y2M0 1017 aa18.87■□□□□ 0.61
CLDND1-221ENST00000510541 TTC26A0AVF1 554 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 DNAJB1P25685 340 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 SLC11A1P49279 550 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 LONRF3Q496Y0 759 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 SLC39A4Q6P5W5 647 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 ATXN2LQ8WWM7 1075 aaKnown RBP18.86■□□□□ 0.61
CLDND1-221ENST00000510541 DDX27Q96GQ7 796 aaKnown RBP18.86■□□□□ 0.61
CLDND1-221ENST00000510541 COLEC11Q9BWP8 271 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 GTPBP4Q9BZE4 634 aaKnown RBP18.86■□□□□ 0.61
CLDND1-221ENST00000510541 ZHX3Q9H4I2 956 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 ALG13Q9NP73 1137 aaKnown RBP18.86■□□□□ 0.61
CLDND1-221ENST00000510541 HCSTQ9UBK5 93 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 SSX2IPQ9Y2D8 614 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 INPP5FQ9Y2H2 1132 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 DERAQ9Y315 318 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 REV3LO60673 3130 aa18.86■□□□□ 0.61
CLDND1-221ENST00000510541 NRP1O14786 923 aa18.85■□□□□ 0.61
CLDND1-221ENST00000510541 ZNF202O95125 648 aa18.85■□□□□ 0.61
CLDND1-221ENST00000510541 LDHAP00338 332 aaKnown RBP18.85■□□□□ 0.61
CLDND1-221ENST00000510541 POMCP01189 267 aa18.85■□□□□ 0.61
CLDND1-221ENST00000510541 CTSAP10619 480 aa18.85■□□□□ 0.61
CLDND1-221ENST00000510541 LIG1P18858 919 aa18.85■□□□□ 0.61
CLDND1-221ENST00000510541 CYP3A5P20815 502 aa18.85■□□□□ 0.61
CLDND1-221ENST00000510541 RPL9P32969 192 aaKnown RBP18.85■□□□□ 0.61
CLDND1-221ENST00000510541 ASIC1P78348 528 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms