RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
POLR2J3-214ENST00000508910 INTS13Q9NVM9 706 aa11.85□□□□□ -0.51
POLR2J3-214ENST00000508910 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-214ENST00000508910 CPSF3Q9UKF6 684 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-214ENST00000508910 TBX21Q9UL17 535 aa11.85□□□□□ -0.51
POLR2J3-214ENST00000508910 PADI3Q9ULW8 664 aa11.85□□□□□ -0.51
POLR2J3-214ENST00000508910 STX10O60499 249 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 PARNO95453 639 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 NPTXRO95502 500 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 CLTAP09496 248 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 EN2P19622 333 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 CDC25BP30305 580 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 GRM5P41594 1212 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 VAMP7P51809 220 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 MCCD1P59942 119 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 NFX1Q12986 1120 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 NR1I3Q14994 352 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 PSMD6Q15008 389 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 ZBTB41Q5SVQ8 909 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 TWF2Q6IBS0 349 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 CRELD2Q6UXH1 353 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 TRIM6Q9C030 488 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 RALGAPA2Q2PPJ7 1873 aa11.84□□□□□ -0.51
POLR2J3-214ENST00000508910 N4BP1O75113 896 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 IL18RAPO95256 599 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 STAG3L1P0CL83 205 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 ZSCAN20P17040 1043 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 TNFSF9P41273 254 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 RAB27AP51159 221 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 UBXN1Q04323 297 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 SURF1Q15526 300 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 SEZ6Q53EL9 994 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 UBXN11Q5T124 520 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 HACE1Q8IYU2 909 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 CEP120Q8N960 986 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 FNBP1Q96RU3 617 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 CCDC94Q9BW85 323 aaPredicted RBP11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 RPF1Q9H9Y2 349 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 TMEM39AQ9NV64 488 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
POLR2J3-214ENST00000508910 A0A1W2PQC6 194 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 LRRIQ3A6PVS8 624 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 TEX33O43247 280 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 CXCL8P10145 99 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 DLATP10515 647 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 GTF2H1P32780 548 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 OSTNP61366 133 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 MYL7Q01449 175 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 DSC3Q14574 896 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 C1orf220Q5T0J3 134 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 VSTM4Q8IW00 320 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 PLEKHO2Q8TD55 490 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 ACAP3Q96P50 834 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 ERGIC2Q96RQ1 377 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 CGRRF1Q99675 332 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 TRAIPQ9BWF2 469 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 OSBPL7Q9BZF2 842 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 WNT8AQ9H1J5 351 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 TMX1Q9H3N1 280 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 NXF3Q9H4D5 531 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 PDE11AQ9HCR9 933 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 TOPORSQ9NS56 1045 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 ITIH6Q6UXX5 1313 aa11.82□□□□□ -0.52
POLR2J3-214ENST00000508910 ANK1P16157 1881 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 GTPBP10A4D1E9 387 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 PMM2O15305 246 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 P4HA2O15460 535 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 NBNO60934 754 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 SKIP12755 728 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 CYP2C18P33260 490 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 RFC2P35250 354 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 PBX1P40424 430 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 FMO5P49326 533 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 MXI1P50539 228 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 AP3M2P53677 418 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 YARSP54577 528 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 DLG4P78352 724 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 CLDN10P78369 228 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 CCDC173Q0VFZ6 552 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 CETN1Q12798 172 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 SPECC1LQ69YQ0 1117 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 WDR49Q8IV35 697 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 CD302Q8IX05 232 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
POLR2J3-214ENST00000508910 TMEM192Q8IY95 271 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms