RNA–Protein interactions for RNA: ENST00000508836.1

C4orf46-203, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 1 (best)

Gene C4orf46, Length 1,103 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-203ENST00000508836 FNTBP49356 437 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 DNM2P50570 870 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 SATB1Q01826 763 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 CREMQ03060 361 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 SF3A2Q15428 464 aaKnown RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 UGCGQ16739 394 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 JAKMIP3Q5VZ66 844 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 FUT10Q6P4F1 479 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 PRSS55Q6UWB4 352 aaPredicted RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 KDF1Q8NAX2 398 aaPredicted RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 ING5Q8WYH8 240 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 MAP4K1Q92918 833 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 NLRP4Q96MN2 994 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 PLA2G2FQ9BZM2 168 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 OSBPL3Q9H4L5 887 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 DISC1Q9NRI5 854 aa12.18□□□□□ -0.46
C4orf46-203ENST00000508836 SUCLA2Q9P2R7 463 aaPredicted RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
C4orf46-203ENST00000508836 MAN2B1O00754 1011 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 SH2B2O14492 632 aaPredicted RBP12.17□□□□□ -0.46
C4orf46-203ENST00000508836 PRC1O43663 620 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 XYLBO75191 536 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 ECI2O75521 394 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 ITGA4P13612 1032 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
C4orf46-203ENST00000508836 CNR2P34972 360 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 CXCL12P48061 93 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 PTH1RQ03431 593 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 DSC1Q08554 894 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 UBXN11Q5T124 520 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 STPG1Q5TH74 334 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
C4orf46-203ENST00000508836 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 CEP68Q76N32 757 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 KSR1Q8IVT5 923 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 TMTC2Q8N394 836 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
C4orf46-203ENST00000508836 DNASE1L2Q92874 299 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 GAD1Q99259 594 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 SH2D3AQ9BRG2 576 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 COLEC11Q9BWP8 271 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 LMAN1LQ9HAT1 526 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 RXFP3Q9NSD7 469 aa12.17□□□□□ -0.46
C4orf46-203ENST00000508836 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 SPEGQ15772 3267 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 IGKV6-21A0A0C4DH24 114 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 TMEM150BA6NC51 233 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 ARL5CA6NH57 179 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 CHMP2AO43633 222 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 CYP3A4P08684 503 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 MLH1P40692 756 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
C4orf46-203ENST00000508836 SCNN1GP51170 649 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 HDAC1Q13547 482 aaPredicted RBP12.16□□□□□ -0.46
C4orf46-203ENST00000508836 CCDC6Q16204 474 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 PABPC1LQ4VXU2 614 aaKnown RBP12.16□□□□□ -0.46
C4orf46-203ENST00000508836 PRR16Q569H4 304 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 LRSAM1Q6UWE0 723 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 MICU3Q86XE3 530 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 FANCBQ8NB91 859 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 SMG8Q8ND04 991 aaKnown RBP12.16□□□□□ -0.46
C4orf46-203ENST00000508836 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 MCRS1Q96EZ8 462 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 BRD9Q9H8M2 597 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 HCFC1R1Q9NWW0 138 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 KCNH3Q9ULD8 1083 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 MRPS23Q9Y3D9 190 aaKnown RBP12.16□□□□□ -0.46
C4orf46-203ENST00000508836 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 ASPMQ8IZT6 3477 aa12.16□□□□□ -0.46
C4orf46-203ENST00000508836 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
C4orf46-203ENST00000508836 TICRRQ7Z2Z1 1910 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 FLNBO75369 2602 aaKnown RBP12.15□□□□□ -0.46
C4orf46-203ENST00000508836 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 HOXA9P31269 272 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
C4orf46-203ENST00000508836 RING1Q06587 406 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 FOXC1Q12948 553 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 GRM2Q14416 872 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 TANGO2Q6ICL3 276 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 PSAPL1Q6NUJ1 521 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 FAM3CQ92520 227 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 ZFP42Q96MM3 310 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 LSM14BQ9BX40 385 aaKnown RBP12.15□□□□□ -0.46
C4orf46-203ENST00000508836 NIFKQ9BYG3 293 aaKnown RBP12.15□□□□□ -0.46
C4orf46-203ENST00000508836 ARRDC1-AS1Q9H2J1 176 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 IFT122Q9HBG6 1241 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 MIOSQ9NXC5 875 aa12.15□□□□□ -0.46
C4orf46-203ENST00000508836 DNMT3BQ9UBC3 853 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms