RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 TTC38Q5R3I4 469 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 LARP1BQ659C4 914 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 EFCAB12Q6NXP0 572 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 PARM1Q6UWI2 310 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 CYP26C1Q6V0L0 522 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 AGMOQ6ZNB7 445 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 ERMNQ8TAM6 284 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 SMG7Q92540 1137 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 MTMR9Q96QG7 549 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 RPS6KC1Q96S38 1066 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 MAP7D2Q96T17 732 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 HERC2P3Q9BVR0 1158 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 NIFKQ9BYG3 293 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 ZSWIM4Q9H7M6 989 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 SPATA6Q9NWH7 488 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 AKT3Q9Y243 479 aa10.24□□□□□ -0.77
UBE2D3-223ENST00000508249 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 LAMTOR5O43504 91 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 LYPLA2O95372 231 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 SOD2P04179 222 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 CD72P21854 359 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 CSTF1Q05048 431 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 SPIRE1Q08AE8 756 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 MLF2Q15773 248 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 HAUS3Q68CZ6 603 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 POTEHQ6S545 545 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 C4orf19Q8IY42 314 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 EMILIN2Q9BXX0 1053 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 GBP3Q9H0R5 595 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 RXFP1Q9HBX9 757 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 LTB4R2Q9NPC1 389 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 FAM105AQ9NUU6 356 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 USP18Q9UMW8 372 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 INPP5FQ9Y2H2 1132 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 EML5Q05BV3 1969 aa10.23□□□□□ -0.77
UBE2D3-223ENST00000508249 C2CD2LO14523 706 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 NRP1O14786 923 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 GDF9O60383 454 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 ZNF623O75123 536 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 GLUD1P00367 558 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 SPATA31D3P0C874 917 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 XRCC6P12956 609 aaKnown RBP eCLIP10.22□□□□□ -0.774e-17■□□□□ 10.6
UBE2D3-223ENST00000508249 MCM7P33993 719 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 PRPHP41219 470 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 DNM2P50570 870 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 SHC2P98077 582 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 BMS1Q14692 1282 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 TARBP2Q15633 366 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 MCTP1Q6DN14 999 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 NCAPH2Q6IBW4 605 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 LILRA6Q6PI73 481 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 SPATA31D4Q6ZUB0 917 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 TRMT1LQ7Z2T5 733 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 NETO1Q8TDF5 533 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 STAMQ92783 540 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 LXNQ9BS40 222 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 OSBPL6Q9BZF3 934 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 TUFT1Q9NNX1 390 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 MRPL17Q9NRX2 175 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 DACT1Q9NYF0 836 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.22□□□□□ -0.776e-9■□□□□ 11.3
UBE2D3-223ENST00000508249 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 F5P12259 2224 aa10.22□□□□□ -0.77
UBE2D3-223ENST00000508249 IGKV6-21A0A0C4DH24 114 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 EML1O00423 815 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 SLC26A4O43511 780 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 TGM5O43548 720 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 DTNBO60941 627 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 STBD1O95210 358 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 ATP2B1P20020 1258 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 RFC5P40937 340 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 TXKP42681 527 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 NTHL1P78549 312 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 DSG1Q02413 1049 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 PRKCQQ04759 706 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 PDIA5Q14554 519 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 LPAL2Q16609 132 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 UBXN11Q5T124 520 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 ARL6IP4Q66PJ3 421 aaKnown RBP10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 GLB1LQ6UWU2 654 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 TMEM87AQ8NBN3 555 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 SLC7A3Q8WY07 619 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 B3GALT6Q96L58 329 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 HSD17B14Q9BPX1 270 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 TMEM175Q9BSA9 504 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms