RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 AIDAQ96BJ3 306 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 INTS12Q96CB8 462 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ZNF274Q96GC6 653 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 METTL2AQ96IZ6 378 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 DDX23Q9BUQ8 820 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 GRIP2Q9C0E4 1043 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 CDH19Q9H159 772 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 RUBCNLQ9H714 662 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 KCTD5Q9NXV2 234 aa11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 ZC3H7BQ9UGR2 993 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-210ENST00000508216 SBNO2Q9Y2G9 1366 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 FAM237AA0A1B0GTK4 181 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 GTPBP10A4D1E9 387 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 SCO2O43819 266 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 GPC4O75487 556 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 ESRRBO95718 433 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 A1BGP04217 495 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 RBP3P10745 1247 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 MYL6BP14649 208 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 NUDT1P36639 197 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 PHKA2P46019 1235 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 FLIIQ13045 1269 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 SQLEQ14534 574 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 LEXMQ3ZCV2 418 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 SLX4IPQ5VYV7 408 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 TSHZ3Q63HK5 1081 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 METTL2BQ6P1Q9 378 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 CEP85Q6P2H3 762 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 CSGALNACT2Q8N6G5 542 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 RPGRQ92834 1020 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 C10orf88Q9H8K7 445 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 HACD3Q9P035 362 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 KIAA1210Q9ULL0 1709 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 SNX12Q9UMY4 172 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
PDLIM5-210ENST00000508216 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 GOLGA8IPA6NC78 632 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 MUSKO15146 869 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 RNGTTO60942 597 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 TRMUO75648 421 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 ARHGEF15O94989 841 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 ALX3O95076 343 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 PRKACAP17612 351 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 RPL9P32969 192 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 IFNAR2P48551 515 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 VPS41P49754 854 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 STAT2P52630 851 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 S100A12P80511 92 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 PPP2R2BQ00005 443 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 CREB5Q02930 508 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 KCNJ8Q15842 424 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 TMEM63BQ5T3F8 832 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 OLFM4Q6UX06 510 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 ADAMTSL2Q86TH1 951 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 GALNT11Q8NCW6 608 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 SUPT20HQ8NEM7 779 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 DACH1Q9UI36 760 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-210ENST00000508216 MIF4GDA9UHW6 222 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 GNPATO15228 680 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 OCM2P0CE71 109 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 SFTPCP11686 197 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 GZMAP12544 262 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 ADSLP30566 484 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 PSMC2P35998 433 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 C2orf54Q08AI8 447 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 PTK2BQ14289 1009 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 RNASEH2BQ5TBB1 312 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 HS2ST1Q7LGA3 356 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 KIF2BQ8N4N8 673 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 BORCS5Q969J3 196 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 GRAMD1AQ96CP6 724 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 CFAP57Q96MR6 1250 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 ANKRD2Q9GZV1 360 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 ETNK1Q9HBU6 452 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 ASIC3Q9UHC3 531 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 DNM3Q9UQ16 869 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 B3GNT3Q9Y2A9 372 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 ATP11BQ9Y2G3 1177 aa11.46□□□□□ -0.57
PDLIM5-210ENST00000508216 GOLGA8QA0A0J9YX86 632 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 A0A0U1RQJ8 604 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 GOLGA8OA6NCC3 632 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 TRIM64A6NGJ6 449 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 TRIM64BA6NI03 449 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms