RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CCDC173Q0VFZ6 552 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 TWF2Q6IBS0 349 aaKnown RBP18.98■□□□□ 0.63
RNF4-209ENST00000507784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.98■□□□□ 0.63
RNF4-209ENST00000507784 USP37Q86T82 979 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 CEP120Q8N960 986 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 TOX2Q96NM4 488 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 FNBP1Q96RU3 617 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 EIF2AQ9BY44 585 aaKnown RBP18.98■□□□□ 0.63
RNF4-209ENST00000507784 RPF1Q9H9Y2 349 aaKnown RBP18.98■□□□□ 0.63
RNF4-209ENST00000507784 ERVK-5Q9HDB9 667 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 PADI3Q9ULW8 664 aa18.98■□□□□ 0.63
RNF4-209ENST00000507784 STX10O60499 249 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 DLATP10515 647 aaKnown RBP18.97■□□□□ 0.63
RNF4-209ENST00000507784 CDC25BP30305 580 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 FAAP100Q0VG06 881 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 PSMD6Q15008 389 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 KYAT1Q16773 422 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 LRRC26Q2I0M4 334 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 C1orf53Q5VUE5 145 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 USP38Q8NB14 1042 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 PLEKHO2Q8TD55 490 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 TMC2Q8TDI7 906 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 SLC35C1Q96A29 364 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 CCDC51Q96ER9 411 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 CCDC94Q9BW85 323 aaPredicted RBP18.97■□□□□ 0.63
RNF4-209ENST00000507784 APOL6Q9BWW8 343 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 PPP1R12CQ9BZL4 782 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 CPSF3Q9UKF6 684 aaKnown RBP18.97■□□□□ 0.63
RNF4-209ENST00000507784 SQORQ9Y6N5 450 aa18.97■□□□□ 0.63
RNF4-209ENST00000507784 LRRIQ3A6PVS8 624 aaPredicted RBP18.96■□□□□ 0.63
RNF4-209ENST00000507784 CLTAP09496 248 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 TNNI1P19237 187 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 IBSPP21815 317 aaPredicted RBP18.96■□□□□ 0.63
RNF4-209ENST00000507784 RBL2Q08999 1139 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 SURF1Q15526 300 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 TRAF7Q6Q0C0 670 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 VSTM4Q8IW00 320 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 BRSK2Q8IWQ3 736 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 TMEM192Q8IY95 271 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 PARD3BQ8TEW8 1205 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 ACAP3Q96P50 834 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 POP1Q99575 1024 aaKnown RBP18.96■□□□□ 0.63
RNF4-209ENST00000507784 HIPK3Q9H422 1215 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 PDE11AQ9HCR9 933 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 CHST12Q9NRB3 414 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 TMEM39AQ9NV64 488 aa18.96■□□□□ 0.63
RNF4-209ENST00000507784 FAM189A1O60320 539 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 PTMAP06454 111 aaKnown RBP18.95■□□□□ 0.62
RNF4-209ENST00000507784 GRM5P41594 1212 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 FMO5P49326 533 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 CCL23P55773 120 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 SYCP1Q15431 976 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 UBXN11Q5T124 520 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 SNTG2Q9NY99 539 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 PARP2Q9UGN5 583 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 UMODL1Q5DID0 1318 aa18.95■□□□□ 0.62
RNF4-209ENST00000507784 GOLGA6L6A8MZA4 724 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 PITPNM1O00562 1244 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 N4BP1O75113 896 aaKnown RBP18.94■□□□□ 0.62
RNF4-209ENST00000507784 CLTBP09497 229 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 CXCL8P10145 99 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 GCLMP48507 274 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 YARSP54577 528 aaKnown RBP18.94■□□□□ 0.62
RNF4-209ENST00000507784 WNT7BP56706 349 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 MYL7Q01449 175 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 PPP3CAQ08209 521 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 MBTPS1Q14703 1052 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 ENOX2Q16206 610 aaKnown RBP18.94■□□□□ 0.62
RNF4-209ENST00000507784 LMBRD2Q68DH5 695 aaPredicted RBP18.94■□□□□ 0.62
RNF4-209ENST00000507784 CGRRF1Q99675 332 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 CRACR2AQ9BSW2 395 aa18.94■□□□□ 0.62
RNF4-209ENST00000507784 PRDM5Q9NQX1 630 aaPredicted RBP18.94■□□□□ 0.62
RNF4-209ENST00000507784 TOPORSQ9NS56 1045 aaPredicted RBP18.94■□□□□ 0.62
RNF4-209ENST00000507784 LACTBL1A8MY62 500 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 IL18RAPO95256 599 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 CYP2C18P33260 490 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 KLK7P49862 253 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 C1orf220Q5T0J3 134 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 SPECC1LQ69YQ0 1117 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 GBP6Q6ZN66 633 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 SCLYQ96I15 445 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 LSM14BQ9BX40 385 aaKnown RBP18.93■□□□□ 0.62
RNF4-209ENST00000507784 IFIH1Q9BYX4 1025 aaKnown RBP18.93■□□□□ 0.62
RNF4-209ENST00000507784 TMX1Q9H3N1 280 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 NXF3Q9H4D5 531 aaKnown RBP18.93■□□□□ 0.62
RNF4-209ENST00000507784 HES2Q9Y543 173 aa18.93■□□□□ 0.62
RNF4-209ENST00000507784 ANK1P16157 1881 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 CITO14578 2027 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 A0A1W2PQC6 194 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 AKAP5P24588 427 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 PBX1P40424 430 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 MXI1P50539 228 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 ENPEPQ07075 957 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 CETN1Q12798 172 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 CBWD6Q4V339 395 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 CBWD3Q5JTY5 395 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 CBWD5Q5RIA9 395 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 PPFIBP1Q86W92 1011 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 HACE1Q8IYU2 909 aa18.92■□□□□ 0.62
RNF4-209ENST00000507784 CPLX3Q8WVH0 158 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms