RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TSSK4Q6SA08 328 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 PRSS55Q6UWB4 352 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 PARM1Q6UWI2 310 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 ANO5Q75V66 913 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 CDR2LQ86X02 465 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 TEX2Q8IWB9 1127 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 COLGALT2Q8IYK4 626 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 RNF149Q8NC42 400 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 CMASQ8NFW8 434 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 PSPC1Q8WXF1 523 aaKnown RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 ING5Q8WYH8 240 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 RSPH1Q8WYR4 309 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 FGF14Q92915 247 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 ZNF707Q96C28 371 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 SHDQ96IW2 340 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 ZFP42Q96MM3 310 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 JAKMIP1Q96N16 626 aaKnown RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 KXD1Q9BQD3 176 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 JPH2Q9BR39 696 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 COLEC11Q9BWP8 271 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 BCO2Q9BYV7 579 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 TRIM6Q9C030 488 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 NT5C3AQ9H0P0 336 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 IFT122Q9HBG6 1241 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 MIOSQ9NXC5 875 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 DLGAP2Q9P1A6 1054 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 STK39Q9UEW8 545 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 PARP2Q9UGN5 583 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 CDV3Q9UKY7 258 aaKnown RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 MTF2Q9Y483 593 aaPredicted RBP6.43□□□□□ -1.38
GYPB-208ENST00000507009 IPPQ9Y573 584 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 CNTNAP2Q9UHC6 1331 aa6.43□□□□□ -1.38
GYPB-208ENST00000507009 EP300Q09472 2414 aaPredicted RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 MTCL1Q9Y4B5 1905 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 DOCK8Q8NF50 2099 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 PATJQ8NI35 1801 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 IGKV6-21A0A0C4DH24 114 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 KANSL1LA0AUZ9 987 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 RCCD1A6NED2 376 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 INO80B-WBP1J3KQ70 363 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 EML1O00423 815 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 EDIL3O43854 480 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 DTNBO60941 627 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 NPTXRO95502 500 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 NCLP19338 710 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 HOXA11P31270 313 aaPredicted RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 QARSP47897 775 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 USP11P51784 963 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 DSG1Q02413 1049 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 NCBP1Q09161 790 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 KRT32Q14532 448 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 MLF2Q15773 248 aaPredicted RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 TMEM132AQ24JP5 1023 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 XKR9Q5GH70 373 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 PPM1LQ5SGD2 360 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 LIN9Q5TKA1 542 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 KIAA0319Q5VV43 1072 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 NCAPH2Q6IBW4 605 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 PHLDB3Q6NSJ2 640 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 FUT10Q6P4F1 479 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 BLOC1S2Q6QNY1 142 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 TPRG1Q6ZUI0 275 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 SRGAP1Q7Z6B7 1085 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 MRPL10Q7Z7H8 261 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 RDM1Q8NG50 284 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 ITFG1Q8TB96 612 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 ATRIPQ8WXE1 791 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 SECISBP2LQ93073 1101 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 NXPE3Q969Y0 559 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 CEP89Q96ST8 783 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 TRAIPQ9BWF2 469 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 GPR62Q9BZJ7 368 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 NXF3Q9H4D5 531 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 PLEKHA4Q9H4M7 779 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 TMEM134Q9H6X4 195 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 UBN1Q9NPG3 1134 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 DLL3Q9NYJ7 618 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.42□□□□□ -1.38
GYPB-208ENST00000507009 DDX25Q9UHL0 483 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 SMG5Q9UPR3 1016 aaKnown RBP6.42□□□□□ -1.38
GYPB-208ENST00000507009 DOCK6Q96HP0 2047 aa6.42□□□□□ -1.38
GYPB-208ENST00000507009 ARID2Q68CP9 1835 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 CASTOR2A6NHX0 329 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 ANHXE9PGG2 379 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 ZBTB39O15060 712 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 B4GALT5O43286 388 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 SLC37A4O43826 429 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 TSPAN1O60635 241 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 ZMYND10O75800 440 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 C8AP07357 584 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 HMGB1P09429 215 aaKnown RBP6.41□□□□□ -1.38
GYPB-208ENST00000507009 LIG1P18858 919 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 RFC5P40937 340 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 ATXN1P54253 815 aaKnown RBP6.41□□□□□ -1.38
GYPB-208ENST00000507009 CYP4A11Q02928 519 aa6.41□□□□□ -1.38
GYPB-208ENST00000507009 SSRP1Q08945 709 aaKnown RBP6.41□□□□□ -1.38
GYPB-208ENST00000507009 STK3Q13188 491 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms