RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TCHPQ9BT92 498 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 C11orf84Q9BUA3 381 aaPredicted RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 KIFC3Q9BVG8 833 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 EIF2AQ9BY44 585 aaKnown RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 MRPL4Q9BYD3 311 aaKnown RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 CCDC113Q9H0I3 377 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 TNMDQ9H2S6 317 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 RSAD1Q9HA92 442 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 MAGEF1Q9HAY2 307 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 TYW1Q9NV66 732 aaKnown RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 ARHGAP28Q9P2N2 729 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 SEL1LQ9UBV2 794 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 KCNH3Q9ULD8 1083 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 IPPQ9Y573 584 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 MRPL42Q9Y6G3 142 aaKnown RBP7.98□□□□□ -1.13
GYPB-206ENST00000506516 TRIOBPQ9H2D6 2365 aa7.98□□□□□ -1.13
GYPB-206ENST00000506516 A0A087X0B3 334 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 MYMKA6NI61 221 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 C5orf67F2Z3F1 127 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 NPTXRO95502 500 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 ALDH2P05091 517 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 IDEP14735 1019 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 ATF7P17544 494 aaPredicted RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 GAP43P17677 238 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 LAG3P18627 525 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 POU3F3P20264 500 aaPredicted RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 ALDH7A1P49419 539 aaKnown RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 GATMP50440 423 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 NCKAP1LP55160 1127 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 KRT17Q04695 432 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 DCAF4L1Q3SXM0 396 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 HERC4Q5GLZ8 1057 aaPredicted RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 NOMO2Q5JPE7 1267 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 CLLU1OSQ5K130 101 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 NT5DC1Q5TFE4 455 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 HAUS6Q7Z4H7 955 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 CDR2LQ86X02 465 aaPredicted RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 CCDC65Q8IXS2 484 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 TMEM161BQ8NDZ6 487 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 P2RX5Q93086 422 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 BICD1Q96G01 975 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 CCDC34Q96HJ3 373 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 ACO2Q99798 780 aaKnown RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 APOL6Q9BWW8 343 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 LMAN2LQ9H0V9 348 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 PDZD7Q9H5P4 517 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 KBTBD4Q9NVX7 518 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 PARP2Q9UGN5 583 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 USP25Q9UHP3 1055 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 PUF60Q9UHX1 559 aaKnown RBP7.97□□□□□ -1.13
GYPB-206ENST00000506516 TNFSF13BQ9Y275 285 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 INPP5FQ9Y2H2 1132 aa7.97□□□□□ -1.13
GYPB-206ENST00000506516 SIP14410 1827 aa7.96□□□□□ -1.13
GYPB-206ENST00000506516 A0A1B0GVL5 298 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 A0A1W2PQ27 194 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 A0A1W2PQ64 194 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 A0A1W2PQD8 194 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 K7ENM7 598 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 CLDN3O15551 220 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 TOM1L1O75674 476 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 POMCP01189 267 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 SLFN14P0C7P3 912 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 AKAP5P24588 427 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 MATR3P43243 847 aaKnown RBP eCLIP7.96□□□□□ -1.14
GYPB-206ENST00000506516 SYKP43405 635 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 YARSP54577 528 aaKnown RBP7.96□□□□□ -1.14
GYPB-206ENST00000506516 GTF2BQ00403 316 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 ADGRE1Q14246 886 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 BMS1Q14692 1282 aaKnown RBP7.96□□□□□ -1.14
GYPB-206ENST00000506516 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 MPZL3Q6UWV2 235 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 ZPBP2Q6X784 338 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 LRRC55Q6ZSA7 311 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 STXBP4Q6ZWJ1 553 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 ZNF720Q7Z2F6 126 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 SPRED2Q7Z698 418 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 THNSL1Q8IYQ7 743 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 KLHL23Q8NBE8 558 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 STAMQ92783 540 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 KCNN1Q92952 543 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 DNAJC19Q96DA6 116 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 THAP11Q96EK4 314 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 ZNF558Q96NG5 402 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 C7orf25Q9BPX7 421 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
GYPB-206ENST00000506516 CCDC94Q9BW85 323 aaPredicted RBP7.96□□□□□ -1.14
GYPB-206ENST00000506516 TARS2Q9BW92 718 aaKnown RBP7.96□□□□□ -1.14
GYPB-206ENST00000506516 ST6GALNAC4Q9H4F1 302 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 CWH43Q9H720 699 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 MRPL44Q9H9J2 332 aaKnown RBP7.96□□□□□ -1.14
GYPB-206ENST00000506516 RNF19AQ9NV58 838 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 PANK4Q9NVE7 773 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 SNTG2Q9NY99 539 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 CHMP5Q9NZZ3 219 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 TBX20Q9UMR3 447 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 PLAGL2Q9UPG8 496 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 EXOC7Q9UPT5 735 aa7.96□□□□□ -1.14
GYPB-206ENST00000506516 USP20Q9Y2K6 914 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms