RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 STK32BQ9NY57 414 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 TRAF3IP3Q9Y228 551 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
SCLT1-207ENST00000506233 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 TNRC18O15417 2968 aaPredicted RBP6.5□□□□□ -1.37
SCLT1-207ENST00000506233 TRIP11Q15643 1979 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 NLRC5Q86WI3 1866 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 A0A1W2PQC6 194 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 FAM86C2PA6NEL3 165 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 KCNJ18B7U540 433 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 ADH1BP00325 375 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 ICAM1P05362 532 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 MYL3P08590 195 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 BMP3P12645 472 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 RRM1P23921 792 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 DGKGP49619 791 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 CENPCQ03188 943 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 KCNJ12Q14500 433 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 R3HDM1Q15032 1099 aaKnown RBP6.5□□□□□ -1.37
SCLT1-207ENST00000506233 NFIL3Q16649 462 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 RINT1Q6NUQ1 792 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 IQUBQ8NA54 791 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 ACRBPQ8NEB7 543 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 CXorf38Q8TB03 319 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 ZNF516Q92618 1163 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 BTBD7Q9P203 1132 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 PPP2R2CQ9Y2T4 447 aa6.5□□□□□ -1.37
SCLT1-207ENST00000506233 VWA5AO00534 786 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 TP73O15350 636 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 ADCY6O43306 1168 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 COL6A1P12109 1028 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 EDNRBP24530 442 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 CASP4P49662 377 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 TOMM20Q15388 145 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 CALCRLQ16602 461 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 KCTD19Q17RG1 926 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 KIAA0319Q5VV43 1072 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 ZNF572Q7Z3I7 529 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 ZBTB46Q86UZ6 589 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 DNAAF5Q86Y56 855 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 CBARPQ8N350 705 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 SYTL5Q8TDW5 730 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 POLR3CQ9BUI4 534 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 TXNRD2Q9NNW7 524 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 SLC39A2Q9NP94 309 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 ARHGEF4Q9NR80 690 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 GPRC5DQ9NZD1 345 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 MRFAP1Q9Y605 127 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 PVALEFA0A1B0GWK0 134 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 RNASEH2AO75792 299 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 DNAJC8O75937 253 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 AKAP3O75969 853 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 HALP42357 657 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 PTPN11Q06124 597 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 PGM5Q15124 567 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 GFOD2Q3B7J2 385 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 PLA2G2CQ5R387 149 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 VARS2Q5ST30 1063 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 LARP4BQ92615 738 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 TRMT2BQ96GJ1 504 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 CEP131Q9UPN4 1083 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 SPENQ96T58 3664 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 CCDC163A0A0D9SF12 145 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 A0A1W2PQJ5 194 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 B4DLN1 442 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 S1PR4O95977 384 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 BCRP11274 1271 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 P2RX5Q93086 422 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 C16orf45Q96MC5 204 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 CUEDC2Q9H467 287 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 AGO4Q9HCK5 861 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 VTA1Q9NP79 307 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 PIM2Q9P1W9 311 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 LUC7L2Q9Y383 392 aaKnown RBP6.49□□□□□ -1.37
SCLT1-207ENST00000506233 FHOD1Q9Y613 1164 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 PTPRJQ12913 1337 aa6.49□□□□□ -1.37
SCLT1-207ENST00000506233 STX10O60499 249 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 TADA3O75528 432 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 BMP15O95972 392 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 CCNE1P24864 410 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 GRIA2P42262 883 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 HTR3AP46098 478 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 ZNF157P51786 506 aaPredicted RBP6.48□□□□□ -1.37
SCLT1-207ENST00000506233 EPHA7Q15375 998 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 ANO5Q75V66 913 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 SV2BQ7L1I2 683 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 LDHDQ86WU2 507 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 GUF1Q8N442 669 aaKnown RBP6.48□□□□□ -1.37
SCLT1-207ENST00000506233 CUL5Q93034 780 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 EIF2AK1Q9BQI3 630 aaKnown RBP6.48□□□□□ -1.37
SCLT1-207ENST00000506233 GSX2Q9BZM3 304 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 LRRC4CQ9HCJ2 640 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 TAB2Q9NYJ8 693 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 KCNG1Q9UIX4 513 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 ZNF215Q9UL58 517 aaPredicted RBP6.48□□□□□ -1.37
SCLT1-207ENST00000506233 ABCB11O95342 1321 aa6.48□□□□□ -1.37
SCLT1-207ENST00000506233 DNAJC25-GNG10A0A024R161 153 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms