RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SORBS3O60504 671 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 GPC5P78333 572 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 PRPF4BQ13523 1007 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 CAPSQ13938 189 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 ANKRD23Q86SG2 305 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 DAAM2Q86T65 1068 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 RPUSD2Q8IZ73 545 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 EIF1ADQ8N9N8 165 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 SLC35G2Q8TBE7 412 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 TAS1R2Q8TE23 839 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 SEMA4DQ92854 862 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 HES6Q96HZ4 224 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 SPATA33Q96N06 139 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 NAP1L3Q99457 506 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 MSTO1Q9BUK6 570 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 SEPT11Q9NVA2 429 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 ADGRA2Q96PE1 1338 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 MIF4GDA9UHW6 222 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 DLATP10515 647 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 TBXAS1P24557 533 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 PLA2G4AP47712 749 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 CDR2Q01850 454 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 POU5F1BQ06416 359 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 LAMC2Q13753 1193 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 CCNI2Q6ZMN8 369 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 NT5DC3Q86UY8 548 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 RASGEF1CQ8N431 466 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 USP38Q8NB14 1042 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 RBAKQ9NYW8 714 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 STIM2Q9P246 746 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 MORF4L1Q9UBU8 362 aa18.61■□□□□ 0.57
TRAPPC11-204ENST00000505676 PGRMC1O00264 195 aaKnown RBP18.6■□□□□ 0.57
TRAPPC11-204ENST00000505676 KCNK3O14649 394 aa18.6■□□□□ 0.57
TRAPPC11-204ENST00000505676 TOM1L1O75674 476 aa18.6■□□□□ 0.57
TRAPPC11-204ENST00000505676 PGK2P07205 417 aa18.6■□□□□ 0.57
TRAPPC11-204ENST00000505676 CXCR5P32302 372 aa18.6■□□□□ 0.57
TRAPPC11-204ENST00000505676 TRIM11Q96F44 468 aa18.6■□□□□ 0.57
TRAPPC11-204ENST00000505676 ARIH2O95376 493 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 C4BPAP04003 597 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 GJA5P36382 358 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 EMID1Q96A84 441 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 NFKBIZQ9BYH8 718 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 CCDC113Q9H0I3 377 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 TMEM59LQ9UK28 342 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 RBM47A0AV96 593 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 PEX10O60683 326 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 SASH3O75995 380 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 CYP11B1P15538 503 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 TNNI1P19237 187 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 USP8P40818 1118 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 POU5F1Q01860 360 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 PLCB4Q15147 1175 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 MAPK6Q16659 721 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZNF484Q5JVG2 852 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 IFT20Q8IY31 132 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 PRPF31Q8WWY3 499 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 RPS6KC1Q96S38 1066 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 CARD9Q9H257 536 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 ERAP1Q9NZ08 941 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 UVRAGQ9P2Y5 699 aa18.59■□□□□ 0.57
TRAPPC11-204ENST00000505676 TMCO5BA8MYB1 307 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 CLDN3O15551 220 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 FTLP02792 175 aaPredicted RBP18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 SMC1AQ14683 1233 aaKnown RBP18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 CASP8Q14790 479 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZNF792Q3KQV3 632 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 WDR78Q5VTH9 848 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 TRIM72Q6ZMU5 477 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 EEPD1Q7L9B9 569 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 BRSK2Q8IWQ3 736 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 PSMB7Q99436 277 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 TARS2Q9BW92 718 aaKnown RBP18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 GTF3C4Q9UKN8 822 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 COL1A2P08123 1366 aa18.58■□□□□ 0.57
TRAPPC11-204ENST00000505676 A0A0U1RQG5 324 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 MYBL1P10243 752 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 PIK3CAP42336 1068 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 MATR3P43243 847 aaKnown RBP eCLIP18.58■□□□□ 0.562e-6■■■■□ 22
TRAPPC11-204ENST00000505676 NLRP11P59045 1033 aaKnown RBP18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 NNTQ13423 1086 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 HSDL1Q3SXM5 330 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 EMBQ6PCB8 327 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 ARMCX2Q7L311 632 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 NOP9Q86U38 636 aaKnown RBP18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 WDR49Q8IV35 697 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 FBXO16Q8IX29 292 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 THAP2Q9H0W7 228 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 MED4Q9NPJ6 270 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 RBM12Q9NTZ6 932 aaKnown RBP18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 PCDHB2Q9Y5E7 798 aa18.58■□□□□ 0.56
TRAPPC11-204ENST00000505676 MAGEB2O15479 319 aa18.57■□□□□ 0.56
TRAPPC11-204ENST00000505676 CYP26A1O43174 497 aa18.57■□□□□ 0.56
TRAPPC11-204ENST00000505676 BUB1BO60566 1050 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC11-204ENST00000505676 SGPL1O95470 568 aa18.57■□□□□ 0.56
TRAPPC11-204ENST00000505676 GH1P01241 217 aa18.57■□□□□ 0.56
TRAPPC11-204ENST00000505676 HLA-DRAP01903 254 aa18.57■□□□□ 0.56
TRAPPC11-204ENST00000505676 LAMTOR4Q0VGL1 99 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms