RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SCN1AP35498 2009 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 RANBP2P49792 3224 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 TRIM49BA6NDI0 452 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 TISP43B9A030 160 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 HOXA2O43364 376 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 EXOC3O60645 756 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 NPTXRO95502 500 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 EOMESO95936 686 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 EPB41P11171 864 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 PSMC2P35998 433 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 GRM5P41594 1212 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 PMS1P54277 932 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 TPM4P67936 248 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 ADAM9Q13443 819 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 SURF1Q15526 300 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 SNRNP35Q16560 246 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 UBXN11Q5T124 520 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 EEF1DP3Q658K8 133 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 DEFB128Q7Z7B8 93 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 CD302Q8IX05 232 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 BADQ92934 168 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 THAP9Q9H5L6 903 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 ELAC1Q9H777 363 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 METTL14Q9HCE5 456 aaKnown RBP11.18□□□□□ -0.62
RFC1-210ENST00000505077 IPPQ9Y573 584 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 PCDHB2Q9Y5E7 798 aa11.18□□□□□ -0.62
RFC1-210ENST00000505077 ZNF233A6NK53 670 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 BECN2A8MW95 431 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 C9IYK1 514 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 IL18RAPO95256 599 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 STAG3L1P0CL83 205 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 EEF1GP26641 437 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 CYP2J2P51589 502 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 YARSP54577 528 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 STX17P56962 302 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 FAM189BP81408 668 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 SPAG1Q07617 926 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 MRPL10Q7Z7H8 261 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 NT5DC4Q86YG4 428 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 BRSK2Q8IWQ3 736 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 ANKRD20A12PQ8NF67 263 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 LINC01599Q8WXQ3 324 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 ZBTB45Q96K62 511 aaPredicted RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 ACAP3Q96P50 834 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 DUSP9Q99956 384 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 EIF2AQ9BY44 585 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 HAPLN2Q9GZV7 340 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 PLEKHA5Q9HAU0 1116 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 TMEM161AQ9NX61 479 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 CPSF3Q9UKF6 684 aaKnown RBP11.17□□□□□ -0.62
RFC1-210ENST00000505077 NFE2L3Q9Y4A8 694 aa11.17□□□□□ -0.62
RFC1-210ENST00000505077 GOLGA6L19H0YKK7 550 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 CLIC2O15247 247 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 INPPL1O15357 1258 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 MGEA5O60502 916 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 AMHP03971 560 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 ADRB2P07550 413 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 KCNJ6P48051 423 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 MCCD1P59942 119 aaPredicted RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 IQCB1Q15051 598 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 CDKAL1Q5VV42 579 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 FRMD5Q7Z6J6 570 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 ZNF598Q86UK7 904 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 NPAS4Q8IUM7 802 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 DHX40Q8IX18 779 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 FAM186BQ8IYM0 893 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 AOPEPQ8N6M6 819 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 SMG8Q8ND04 991 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 MED15Q96RN5 788 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 FAM213AQ9BRX8 229 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 NXF3Q9H4D5 531 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 PCIF1Q9H4Z3 704 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 ASB7Q9H672 318 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 RPF1Q9H9Y2 349 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 ZMYND8Q9ULU4 1186 aaPredicted RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 GIT1Q9Y2X7 761 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 LAMA2P24043 3122 aaKnown RBP11.16□□□□□ -0.62
RFC1-210ENST00000505077 TSC2P49815 1807 aa11.16□□□□□ -0.62
RFC1-210ENST00000505077 ENPP3O14638 875 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 STX10O60499 249 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 AKAP3O75969 853 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 RECQL4O94761 1208 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 FGBP02675 491 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 ITGA4P13612 1032 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 KRT13P13646 458 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 ZNF18P17022 549 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms